SGN Marker C2_At3g12080

SGN-M7710
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle311665 (SGN)
128224 (CGN)
---
Solanum tuberosumSingleSGN-U255576---
ArabidopsisSingleAt3g12080 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 26137)
Chromosome
3
Position
3.85 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41370
Forward primer (5'-3')
AGGGAAAGAAAACTACGTTCCTGC
Accessions and product sizes
Solanum pennellii TA56
2800
Solanum lycopersicum TA209
2800
Approximate temperature
55°C
Reverse primer (5'-3')
AGCCTCAATAACAAGAGCCACAACATC
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
750
Solanum lycopersicum TA209
1400
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At3g12080  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7710 marker 7710
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)