SGN Marker C2_At3g18520

SGN-M7789
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U201166---
Lycopersicon CombinedMultipleSGN-U223125---
Solanum tuberosumSingleSGN-U256515---
ArabidopsisSingleAt3g18520 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38483)
Chromosome
3
Position
144.50 cM
Confidence
F(LOD3)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 41408
Forward primer (5'-3')
ACTCAGAGGAAAATATTGAAGCCGTTG
Accessions and product sizes
Solanum lycopersicum TA209
750
Solanum pennellii TA56
750
Approximate temperature
55°C
Reverse primer (5'-3')
ACAGAAGCCCATGGCCTGTTTCACAC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
550
Solanum pennellii TA56
750
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 26219)
Chromosome
3
Position
6.36 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At3g18520  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7789 marker 7789
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