SGN Marker C2_At3g20230

SGN-M7811
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle311260 (SGN)
128732 (CGN)
---
Lycopersicon CombinedSingleSGN-U224911---
Solanum tuberosumSingleSGN-U256722---
ArabidopsisSingleAt3g20230 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38495)
Chromosome
1
Position
47.50 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39726
Forward primer (5'-3')
TCCAATTCCCTTTCATGGTCTTCTTC
Accessions and product sizes
Solanum pennellii TA56
1200
Solanum lycopersicum TA209
1200
Approximate temperature
55°C
Reverse primer (5'-3')
ACCCTAGCAGCATCGTTATCAGTAAG
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
650
Solanum lycopersicum TA209
500
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 26241)
Chromosome
3
Position
7.06 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At3g20230  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7811 marker 7811
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