SGN Marker C2_At3g27160

SGN-M7896
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U198584---
Lycopersicon CombinedSingleSGN-U214857---
Solanum tuberosumSingleSGN-U246228---
ArabidopsisSingleAt3g27160 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 26329)
Chromosome
3
Position
10.02 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41452
Forward primer (5'-3')
TTGTCCCTCACTTGCTTATGCGAAC
Accessions and product sizes
Solanum pennellii TA56
450
Solanum lycopersicum TA209
450
Approximate temperature
55°C
Reverse primer (5'-3')
TGAGAAGTTTCTTGGTGGGCCACG
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
250
Solanum pennellii TA56
375
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At3g27160  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7896 marker 7896
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