SGN Marker C2_At3g48540

SGN-M7953
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle302778 (SGN)
120261 (CGN)
---
Lycopersicon CombinedSingleSGN-U240436---
Solanum tuberosumSingleSGN-U253670---
ArabidopsisSingleAt3g48540 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 26387)
Chromosome
3
Position
18.00 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41470
Forward primer (5'-3')
ATTGGATACAATGGGTTCCCACG
Accessions and product sizes
Solanum lycopersicum TA209
750
Solanum pennellii TA56
750
Approximate temperature
55°C
Reverse primer (5'-3')
TCAGAACCATCTAATCTCTTCTCCAC
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
450
Solanum lycopersicum TA209
450
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At3g48540  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7953 marker 7953
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