SGN Marker C2_At3g57680

SGN-M8076
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle304116 (SGN)
123273 (CGN)
---
Capsicum annuumSingleSGN-U205312---
Lycopersicon CombinedMultipleSGN-U221048---
Solanum tuberosumSingleSGN-U263457---
ArabidopsisSingleAt3g57680 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38582)
Chromosome
3
Position
72.60 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 41512
Forward primer (5'-3')
ACTTTCAATCATCAAGATTGGGATTTG
Accessions and product sizes
Solanum pennellii TA56
525
Solanum lycopersicum TA209
525
Approximate temperature
60°C
Reverse primer (5'-3')
ACCTTGTAAATTTCCATCACTTCCTATTC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
525
Solanum pennellii TA56
375
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 26512)
Chromosome
3
Position
21.39 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At3g57680  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8076 marker 8076
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