SGN Marker C2_At4g16146

SGN-M8262
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle311432 (SGN)
127568 (CGN)
---
Lycopersicon CombinedSingleSGN-U239774---
ArabidopsisSingleAt4g16146 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 26703)
Chromosome
4
Position
9.14 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41563
Forward primer (5'-3')
AGGAGTTTGCGATCAAAAATCAACG
Accessions and product sizes
Solanum pennellii TA56
800
Solanum lycopersicum TA209
800
Approximate temperature
55°C
Reverse primer (5'-3')
ATGTACAAGCAGGTCTTCTAGGAGGC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
375+400+550
Solanum pennellii TA56
350+400+550
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At4g16146  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8262 marker 8262
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