SGN Marker C2_At4g16444

SGN-M8272
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle301489 (SGN)
122848 (CGN)
---
Capsicum annuumSingleSGN-U204526---
Lycopersicon CombinedSingleSGN-U227468---
Solanum tuberosumSingleSGN-U254288---
ArabidopsisSingleAt4g16444 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 26713)
Chromosome
4
Position
9.28 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41566
Forward primer (5'-3')
TCAACATTTGCACAAGCTGCAAAAC
Accessions and product sizes
Solanum pennellii TA56
350
Solanum lycopersicum TA209
350
Approximate temperature
55°C
Reverse primer (5'-3')
AGCCACAGGAATACGCCAAAACC
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
200+330
Solanum lycopersicum TA209
150+320+340
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At4g16444  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8272 marker 8272
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