SGN Marker C2_At4g24190

SGN-M8346
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle300737 (SGN)
120268 (CGN)
---
Lycopersicon CombinedSingleSGN-U213753---
Solanum tuberosumMultipleSGN-U243772---
ArabidopsisSingleAt4g24190 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 26787)
Chromosome
4
Position
12.55 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41589
Forward primer (5'-3')
TGGAGTCACTTCAATGCTGAAGGTG
Accessions and product sizes
Solanum pennellii TA56
1800
Solanum lycopersicum TA209
1700
Approximate temperature
53°C
Reverse primer (5'-3')
AGTTTGCGGATCATGTCAAGGGC
Digested band sizes (using unknown enzyme)
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Other COSII sequence data 

Alignment of Arabidopsis CDS and edited Asterid unigenes, FASTA
Alignment of DNA and translated peptides from Arabidopsis CDS and edited Asterid unigenes, plain text
Alignment of translated peptides from Arabidopsis CDS and edited Asterid unigenes, ClustalW
Alignment of translated peptides from Arabidopsis CDS and edited Asterid unigenes, FASTA

Genomic location of C2_At4g24190  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8346 marker 8346
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)