SGN Marker C2_At5g01960

SGN-M8548
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle300753 (SGN)
121471 (CGN)		---
Lycopersicon CombinedMultipleSGN-U218058---
Solanum tuberosumSingleSGN-U266698---
ArabidopsisSingleAt5g01960 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 26996)
Chromosome
5
Position
0.37 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41657
Forward primer (5'-3')
AATTTGGATTACGGCCTTCATGTTC
Accessions and product sizes
Solanum lycopersicum TA209
225
Solanum pennellii TA56
225
Approximate temperature
60°C
Reverse primer (5'-3')
ACCAAGAAGGACAGTGATCTTTCTCTC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
225
Solanum pennellii TA56
125
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At5g01960  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8548 marker 8548
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