SGN Marker C2_At5g05200

SGN-M8583
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U201222---
Lycopersicon CombinedSingleSGN-U226991---
ArabidopsisSingleAt5g05200 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 27034)
Chromosome
5
Position
1.55 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41673
Forward primer (5'-3')
AAACTCGTCCACTGGAACTACCAACTC
Accessions and product sizes
Solanum lycopersicum TA209
750
Solanum pennellii TA56
750
Approximate temperature
55°C
Reverse primer (5'-3')
TACTCCGGTGGAAACAACGTGGGTG
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
750
Solanum lycopersicum TA209
475
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At5g05200  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8583 marker 8583
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