SGN Marker C2_At5g08580

SGN-M8620
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U199828---
Lycopersicon CombinedSingleSGN-U218999---
Solanum tuberosumSingleSGN-U250672---
ArabidopsisSingleAt5g08580 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38765)
Chromosome
2
Position
2.00 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39914
Forward primer (5'-3')
TGCGCTCCAACTTCACTTTTGACTC
Accessions and product sizes
Solanum lycopersicum TA209
350
Solanum pennellii TA56
350
Approximate temperature
55°C
Reverse primer (5'-3')
ACCATCAGATGGGTTGACATCAATCTT
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
225
Solanum pennellii TA56
350
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 27075)
Chromosome
5
Position
2.78 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At5g08580  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8620 marker 8620
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