SGN Marker C2_At5g10080

SGN-M8634
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle303537 (SGN)
124102 (CGN)
---
Lycopersicon CombinedSingleSGN-U236295---
ArabidopsisSingleAt5g10080 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 27090)
Chromosome
5
Position
3.15 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41694
Forward primer (5'-3')
TATTGAGCAGACGAGCTTCAAAGCC
Accessions and product sizes
Solanum pennellii TA56
650
Solanum lycopersicum TA209
650
Approximate temperature
58°C
Reverse primer (5'-3')
AGCTGCTATTCATCGTGAACTTCAGAG
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
500
Solanum pennellii TA56
600
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At5g10080  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8634 marker 8634
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