SGN Marker SSR192
SGN-M865
Synonyms |
Locus associations |
SSR info |
Annealing temperatures: Low: 40 High: 45
Repeat motif: ATC Repeat number: 6
Repeat motif: Repeat number:
Forward primer: ACAACATGGGAAGCACTTGA
Reverse primer: ATTAAATTGGGCCATGGTGA
Predicted size: 168
Derivations |
This marker was derived from EST read SGN-E98975
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| ![]() Sun1642 x LA1589 |
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| ![]() Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589 |
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| ![]() Tomato-EXPIMP 2008 |
| ![]() Tomato-EXPEN 2000 |
Other PCR data |
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Overgo hybridization and physical mapping |
SSR192 was used as an overgo probe on plate 9 [well E3]
Plausible BAC Matches: P238D05, P290O12, P299N19, P235J18, P138O20, P100B24, P142O05, P144L08, P194M14, P017P20, P056M23, P262N20
Overgo Sequences
A sequence
AATCATATCGTCGCCGACGAATCC
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B sequence
ACGAACATCGTACGGTGGATTCGT
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AB sequence
AATCATATCGTCGCCGACGAATCCACCGTA
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Marker sequence
CCTTAAACAACATGGGAAGCACTTGAAAAAAATTGAAAATTACAAAAATA
CTTGTTCAACCTAATTTAACATTGATCATCATCATCATCATCATGAAATT AATTAAAGAGACAAAATTTGAAGAAAACCTTGATAGGTAACACCACCATT TTCTTCACCATGGCCCAATTTAATCATAGCTTTGATATCATCATCATCAA CTTGAAGCCCAGCCCAACTCAAATAACTTTTCAAATCCTCAACCCCAACT TTACCATCTCCATCTTTGTCAATCACCTTGAAGACATCCTCCATTACATT CATTTCTCCTCGTAATGCTCCGTTTTTCCTCTTCTCCTCGCTGTTTCTGC TAATAGAACTATCCAAAACCTTCTCGAAATCCTCAAATTCAACGTATCCA TCTTCGTTCGAATCCGCCACCGTCATCATCGTACCAATCATATCGTCGCC GACGAATCCACCGTACGATGTTCGTAGATCTTCTCTGCTAATCTTTCCAT CGCGGTCAACGTCCAAAACGTCGAATGCTGACCGCAGATTTGGTTTTCCG GCGCCGGCGGCAGAATGCAAAACACTTCCGGTGGGACACATTTTTCCGGT GTGTTTTGCAGGTAATTGAAGAAGTAAAATCTTTTGTAAATTTAAGCTTG GTGGCAATTCAACC |
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