SGN Marker C2_At5g18590

SGN-M8755
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U203599---
Lycopersicon CombinedSingleSGN-U222805---
ArabidopsisSingleAt5g18590 on TAIR---
Mapped locations  
Map: Tomato - Kazusa and SolCAP markers mapped to genome   
Map version
105 (location: 49293)
Chromosome
1
Position
68.58 MB
Confidence
uncalculated
Protocol
CAPS


Tomato - Kazusa and SolCAP markers mapped to genome

Map: Kazusa F2-2000 genetic map   
Map version
103 (location: 47234)
Chromosome
1
Position
40.30 cM
Confidence
uncalculated
Protocol
unknown


Kazusa F2-2000 genetic map

Map: Pepper-COSII   
Map version
58 (location: 41519)
Chromosome
1
Position
140.90 cM
Confidence
F(LOD3)
Protocol
CAPS


Pepper-COSII

PCR data   Exp. ID 43495
Forward primer (5'-3')
TCAAACCATGTGTCTGCCCTCTATGATG
Accessions and product sizes
Approximate temperature
55°C
Reverse primer (5'-3')
ATCCACGTATTTTAATTCTTGACCATGC
Digested band sizes (using unknown enzyme)
Mg+2 concentration
Unknown
   Enzymes
  

Map: Tomato-EXPEN 2000   
Map version
52 (location: 38803)
Chromosome
1
Position
37.00 cM
Confidence
CF(LOD3)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 41731
Forward primer (5'-3')
TCAAACCATGTGTCTGCCCTCTATGATG
Accessions and product sizes
Approximate temperature
Unknown
Reverse primer (5'-3')
ATCCACGTATTTTAATTCTTGACCATGC
Digested band sizes (using unknown enzyme)
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 27214)
Chromosome
5
Position
6.18 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At5g18590  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D8755 marker 8755
User comments 
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