SGN Marker TG69
SGN-M95
Synonyms |
Locus associations |
RFLP details |
Insert size
5300
|
Vector
pUC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image |
Forward sequence
GAGATTCTTTCTTTTGAAACTTTTGGATGTAAGTATTACTAGAATACTCCTTGTGTATTCTTGTCTATAATACAAGTTACCTTTCTAAAA
AAATTATAAGATTACTGAAAGTGAAAGGATATCAAGAGAAACACACCTGATAGTATCTTCCATCTAGTTTCTTAATGCCATAACCCAGTT GAACAGTTCCAAATGACTTTAAATCTGTAAGGACCCCATTTTTTCGATAGACATGCTTCCCAACCTTTGCAATGAGGTCCATCATAGCCT CCTTCTTTACATGGGGTTTCAGTAACAGCATACAGTCATATAGAGGCATCTTTTGTCTTCTCTTGATTCAACCAACTTCAGGAATCACAG AACTGAATTACGTCAAATCTTGGAAAATGAAAAACTACGACAAAATGCACACTGCAGGTAATCAAAGCCAACTCAACCAAGAAGTTCCCT CATTGAAGGAATCATACTCCAAAATGTTGTAACACATTGAGAAATTTTCTTAG |
Reverse sequence
ATACAATCTATTTGGGGATTAAGCTGATAAATGTATCATATAACATATACACACATCAAAGAAGTTGGCGTATACTGAAACACGCATTTC
CAGCACTGCTGAGTTTTTAGCAAAAACAGTTTTGGCAAAATTAAAGTTCTCAAGAGTTTTTAAGAACCATTGCACAATACTTTTTTGAAA ATTGAGTTTCTAACACTTTCTCCAAAACCTCAACAACTGAGTTCCCAAAAAACTCAAACACCAAAATTCTTCCATACTGTCAAAAGCTGA ATCAAAATTCAGCTAAACAAATTCCATATATATACATAAAACGGCAAGAGGTAGGACCTGGTGAAGTATAGGGAAGTCGGAACGGGTGAT ATGCCCTAGCGAACCGGGTCCAAGTTTCGGGCCTTCTACTAATGGAGCTGAAGCTGATGCTGATGCTGAAGCTGAAATATGTAACCGTCG GTAACTCCATGGGAACGAATTGGAGC |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U165819 | 6.7e-19 | 59 (11.7% of RFLP seq) | + |
SGN-U162389 | 3.1e-67 | 212 (42.1% of RFLP seq) | + |
SGN-U148733 | 4e-119 | 215 (42.7% of RFLP seq) | + |
SGN-U154497 | 5.3e-78 | 150 (31.5% of RFLP seq) | - |
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| ![]() Potato meta-QTL consensus map |
| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXHIR 1997 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Potato-TXB 1992 |
Overgo hybridization and physical mapping |
TG69 was used as an overgo probe on plate 5 [well F3]
Plausible BAC Matches: P285F14, P108A18, P212A18, P170J13, P311A16, P299E20, P006A24, P311G17, P200D06, P160D23, P006N20, P104F21, P149P03, P172K24, P261N11, P192G24
Overgo Sequences
A sequence
TGCTTCCCAACCTTTGCAATGAGG
|
B sequence
AGGAGGCTATGATGGACCTCATTG
|
AB sequence
TGCTTCCCAACCTTTGCAATGAGGTCCATC
|
Marker sequence
GAGATTCTTTCTTTTGAAACTTTTGGATGTAAGTATTACTAGAATACTCC
TTGTGTATTCTTGTCTATAATACAAGTTACCTTTCTAAAAAAATTATAAG ATTACTGAAAGTGAAAGGATATCAAGAGAAACACACCTGATAGTATCTTC CATCTAGTTTCTTAATGCCATAACCCAGTTGAACAGTTCCAAATGACTTT AAATCTGTAAGGACCCCATTTTTTCGATAGACATGCTTCCCAACCTTTGC AATGAGGTCCATCATAGCCTCCTTCTTTACATGGGGTTTCAGTAACAGCA TACAGTCATATAGAGGCATCTTTTGTCTTCTCTTGATTCAACCAACTTCA GGAATCACAGAACTGAATTACGTCAAATCTTGGAAAATGAAAAACTACGA CAAAATGCACACTGCAGGTAATCAAAGCCAACTCAACCAAGAAGTTCCCT CATTGAAGGAATCATACTCCAAAATGTTGTAACACATTGAGAAATTTTCT TAG |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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