EST details — SGN-C15246
| Search information |
| Request: SGN-C15246 | Match: SGN-C15246 |
| Request From: web user | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C15246 | Clone name: cLED-11-F6 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: Alias clone SGN-C181228 is on microarray TOM1: SGN-S1-1-7.3.14.4
This clone has been mapped as cLED-11-F6.
| Additional sequencing |
| Clone: SGN-C181228 [TUS-36-G18] | Trace: SGN-T193559 | EST: SGN-E392233 | Direction: 3' | Facility: INRA |
| Clone: SGN-C181228 [TUS-36-G18] | Trace: SGN-T199180 | EST: SGN-E397854 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E235561 | Length: 553 bp (784 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E235561 [] (trimmed)
CAGCCTGGCTATCCTGAATATATTCTTAAAGCAGGCGACGAGAATTAACTTGGAGGAGTATATTTCTTTGGTAGTTGATGCTACTGTGAAAACTG
GAATCAGGCAGCAAATGGAGGCTTTTAGATCTGGCTTCAATCAGGTTTTCGACTTTTCAGCTCTGCAAATATTCTCTCCTTCAGAGTTAGACTAT
CTATTATGTGGCCGTAGAGAGCTGTGGAAGCCTGAGACGCTAGTAGATCACATAAAATTCGATCATGGATTCACATCCAAGAGTCCTCCTATTAT
TCATTTACTAGAGATTATGGGAGAGTTCACACCTGAGCAGCAACGAGCATTCTGCCAGTTTGTTACTGGTGCTCCTCGGCTCCCCGCAGGTGGTC
TTGCTTCTCTGAATCCTAAGTTGACAATTGTGAGGAAGCATTCATCTAGTGCTGGCAATGCAGCACAGAACAGTAATGCCCCATCAGAATCTGCA
GATGAAGACCTACCCAGTGTGATGACATGTGCTAATTACTTGAAACTCCCTCCCTATTCTACTAAAGAGATCATGTCC
GAATCAGGCAGCAAATGGAGGCTTTTAGATCTGGCTTCAATCAGGTTTTCGACTTTTCAGCTCTGCAAATATTCTCTCCTTCAGAGTTAGACTAT
CTATTATGTGGCCGTAGAGAGCTGTGGAAGCCTGAGACGCTAGTAGATCACATAAAATTCGATCATGGATTCACATCCAAGAGTCCTCCTATTAT
TCATTTACTAGAGATTATGGGAGAGTTCACACCTGAGCAGCAACGAGCATTCTGCCAGTTTGTTACTGGTGCTCCTCGGCTCCCCGCAGGTGGTC
TTGCTTCTCTGAATCCTAAGTTGACAATTGTGAGGAAGCATTCATCTAGTGCTGGCAATGCAGCACAGAACAGTAATGCCCCATCAGAATCTGCA
GATGAAGACCTACCCAGTGTGATGACATGTGCTAATTACTTGAAACTCCCTCCCTATTCTACTAAAGAGATCATGTCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E235561] | SGN-U568655 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T51571 [Download] [View] | Facility Assigned ID: TOVBR27TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0073 | Quality Trim Threshold: 14.5 |
Working
