EST details — SGN-C15356
| Search information |
| Request: SGN-C15356 | Match: SGN-C15356 |
| Request From: web user | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C15356 | Clone name: cLED-11-L12 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: Alias clone SGN-C175492 is on microarray TOM1: SGN-S1-1-7.4.13.19
This clone has been mapped as cLED-11-L12.
| Additional sequencing |
| Clone: SGN-C175492 [TUS-21-H18] | Trace: SGN-T190725 | EST: SGN-E378111 | Direction: 3' | Facility: INRA |
| Clone: SGN-C175492 [TUS-21-H18] | Trace: SGN-T190726 | EST: SGN-E378112 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E235413 | Length: 599 bp (786 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E235413 [] (trimmed)
TTATCAAAAGAAATAGACTTTTGTCCACATCAGAAGTTAAAACAAAATCCTACTGATACAAAGAGTACAGTCACTCAATAATTCTGCATAATTAG
TACGTAAAACTCCTAGAATTACAAGTAAATTCTGGATTAACAGTCATGATTTCAACAAACTAAACACTATGTTAATGCTCTATGACATCCAAGTT
TGAGGTTAGCCACAACACTGAAAATGAGTGAGGTTGTCATGTACTAGAATCTATCTCCGGCAGATTTCTCAACATCGTTGCAAAGTCAAAATATC
AGCTTTTTGCATAATCCTTTGTCAATTCTTTTATACCGACTTACAGGCTTCATAGGAGCAGCAGGGCAAGTATCAGAATCTCCACTAAGATGAGG
TGCAGAGGTAGGTGTCTTGTATCCATCAGAATCTGAAAGTGGAGTTGAGGCTTTTAAATGAAGATCCTCATTAATAACTTGTAGGAGAGAATTGT
ACAACAATTCAAATAACATCTCATCCTCAGACACCGTTCCCACATTTTCACTGAAATTCAAAGTCTCCTCAAAGTATAGCTGGCGTGTCACTTTG
GCTCGTGAATCTGTAAAATACTTTTTACA
TACGTAAAACTCCTAGAATTACAAGTAAATTCTGGATTAACAGTCATGATTTCAACAAACTAAACACTATGTTAATGCTCTATGACATCCAAGTT
TGAGGTTAGCCACAACACTGAAAATGAGTGAGGTTGTCATGTACTAGAATCTATCTCCGGCAGATTTCTCAACATCGTTGCAAAGTCAAAATATC
AGCTTTTTGCATAATCCTTTGTCAATTCTTTTATACCGACTTACAGGCTTCATAGGAGCAGCAGGGCAAGTATCAGAATCTCCACTAAGATGAGG
TGCAGAGGTAGGTGTCTTGTATCCATCAGAATCTGAAAGTGGAGTTGAGGCTTTTAAATGAAGATCCTCATTAATAACTTGTAGGAGAGAATTGT
ACAACAATTCAAATAACATCTCATCCTCAGACACCGTTCCCACATTTTCACTGAAATTCAAAGTCTCCTCAAAGTATAGCTGGCGTGTCACTTTG
GCTCGTGAATCTGTAAAATACTTTTTACA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E235413] | SGN-U563040 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T51423 [Download] [View] | Facility Assigned ID: TOVBR66TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.950 | Expected Error Rate: 0.0045 | Quality Trim Threshold: 14.5 |
Working
