EST details — SGN-T103348
| Search information |
| Request: TMEAM12TH | Match: SGN-T103348 |
| Request From: web user | Match Type: Chromatogram internal Identifier |
| Clone information |
| SGN ID: SGN-C87330 | Clone name: cLET-4-A23 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C190655 [TUS-60-P13] | Trace: SGN-T341480 | EST: SGN-E540605 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C190655 [TUS-60-P13] | Trace: SGN-T341483 | EST: SGN-E540608 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E289677 | Length: 481 bp (825 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E289677 [] (trimmed)
CGGTTATGGGAGGCTTGGTCATCGAGAACAGAAGGACGAGTTTGCTCCTCGACGAGTTGATGTTTTTACACGGCAGAATGTCTTGCCTCCAGATG
CAATAGTTTCAGCAGGTTCTGCCAGCTCATCATGTACTGCCGGAGGAGGGCAGCTTTACATGTGGGGAAAAATTAAGAGCACAGGAGATGATTCG
ATGTATCCCAAACCTCTTCTGGATTTGAGTGGGTGGAACCTCCGATGTATGGATTCTGGCTATATGCACCACTTTGTTGGTGCTGATTCCTCTTG
CATAAGTTGGGGCCTTGCACAGTGTGGGGAGCTGGGTTATGGACCACATGGACAGAAATCTTCTGCAGTTCCTAAGAAGGTGGACATTTTAGATG
GCATGCATGTTATCAGTGTTGCTTGTGGATTTGCCCACTCCATGGTTGTTATTGATAGGACAAATGTTGAGGATCGACTTGAGCAGCTTGATGTA
TATGAT
CAATAGTTTCAGCAGGTTCTGCCAGCTCATCATGTACTGCCGGAGGAGGGCAGCTTTACATGTGGGGAAAAATTAAGAGCACAGGAGATGATTCG
ATGTATCCCAAACCTCTTCTGGATTTGAGTGGGTGGAACCTCCGATGTATGGATTCTGGCTATATGCACCACTTTGTTGGTGCTGATTCCTCTTG
CATAAGTTGGGGCCTTGCACAGTGTGGGGAGCTGGGTTATGGACCACATGGACAGAAATCTTCTGCAGTTCCTAAGAAGGTGGACATTTTAGATG
GCATGCATGTTATCAGTGTTGCTTGTGGATTTGCCCACTCCATGGTTGTTATTGATAGGACAAATGTTGAGGATCGACTTGAGCAGCTTGATGTA
TATGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E289677] | SGN-U567322 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T103348 [Download] [View] | Facility Assigned ID: TMEAM12TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.953 | Expected Error Rate: 0.0072 | Quality Trim Threshold: 14.5 |
Working
