EST details — SGN-T107581
| Search information |
| Request: TMEDA41TH | Match: SGN-T107581 |
| Request From: web user | Match Type: Chromatogram internal Identifier |
| Clone information |
| SGN ID: SGN-C82580 | Clone name: cLET-20-H9 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184578 is on microarray TOM1: SGN-S1-1-1.3.14.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184578 [TUS-45-C8] | Trace: SGN-T196536 | EST: SGN-E395210 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184578 [TUS-45-C8] | Trace: SGN-T198605 | EST: SGN-E397279 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E295167 | Length: 561 bp (952 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E295167 [] (trimmed)
GAAATGGATGATGAAGCTAATTCTTGGATTAGGAGAACAAAGTTTTCTCATACAGTTTGTCATAGGTTGGATTCTGCAAGATTGACGTCTATTCC
TATTAGTACTATTCAGTCAGGAAGAATTGCTGGAGCAAAAACTAGACCTGGATCAGGTTCTTTTAATTCAATACCTGAGCCAACTGTTGCGCCTC
TTCAGCGCAATCCAACTACAAACAAACATAGGACTGTATCACCTCATCCAGAAACATCAGTTCCAGATACCTTTAAGGAGGCTCGATCTAGTCAG
AAGAGATTTTCAACTCCGCGTCCACAAAGGAAGGAACATGAGAAGAAGATTGTGAGTAAGTCGTTTTATAAAGATTCTAGGGAATCGAAATCACC
TACGTTGAGATCTCCTGGTTCAAGATCTCCATCAAATACAAGTCCCCTACGGCATTTCACATCATTCAAATTCCATGACAAAACAAAGAGCCGAA
AGGATTCAGCATGGAGTAGGTACTTTGATCATGGTGTTGGGAGGGTGAGTTCTGTGGAAACAGCAGATGAATATACAATTGATCTT
TATTAGTACTATTCAGTCAGGAAGAATTGCTGGAGCAAAAACTAGACCTGGATCAGGTTCTTTTAATTCAATACCTGAGCCAACTGTTGCGCCTC
TTCAGCGCAATCCAACTACAAACAAACATAGGACTGTATCACCTCATCCAGAAACATCAGTTCCAGATACCTTTAAGGAGGCTCGATCTAGTCAG
AAGAGATTTTCAACTCCGCGTCCACAAAGGAAGGAACATGAGAAGAAGATTGTGAGTAAGTCGTTTTATAAAGATTCTAGGGAATCGAAATCACC
TACGTTGAGATCTCCTGGTTCAAGATCTCCATCAAATACAAGTCCCCTACGGCATTTCACATCATTCAAATTCCATGACAAAACAAAGAGCCGAA
AGGATTCAGCATGGAGTAGGTACTTTGATCATGGTGTTGGGAGGGTGAGTTCTGTGGAAACAGCAGATGAATATACAATTGATCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E295167] | SGN-U579192 | Tomato 200607 | Build 2 | 35 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T107581 [Download] [View] | Facility Assigned ID: TMEDA41TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0032 | Quality Trim Threshold: 14.5 |
Working
