EST details — SGN-T118037
| Search information |
| Request: TRXCA53TH | Match: SGN-T118037 |
| Request From: web user | Match Type: Chromatogram internal Identifier |
| Clone information |
| SGN ID: SGN-C93388 | Clone name: cLEX-14-I9 |
| ||
| Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180115 [TUS-33-I9] | Trace: SGN-T186493 | EST: SGN-E374041 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180115 [TUS-33-I9] | Trace: SGN-T186494 | EST: SGN-E374042 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E305551 | Length: 655 bp (884 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E305551 [] (trimmed)
GAGTCCAAGATGATTTGAAGCGTGCAACTGGAGAATTTGTCAAAGATGAGACAGATGCTAATAAACTTAACCGGGTTCTGCAACTAACAGGATTT
AGCGACCCTGTTTATGCGGAAGCATATGTAACAGTTCATCATTATGATATTGTCCTGGATGTGACAGTTATTAATAGAACTAAAGAGACCCTCCA
GAATTTATGTTTGGAATTGGCAACTATGGGTGATCTTAAACTTGTTGAGCGTCCACAGAATTATACTCTAGCTCCTGAGTCGAGCAAACAGATAA
AAGCAAACATCAAGGTGTCCTCAACTGAGACTGGCGTCATTTTTGGGAACATTGTTTATGAGACATCGAATGTGTTTGACCGGATGGTGGTTGTG
CTAAATGACATTCATATTGACATCATGGATTATATATCCCCTGCAGTGTGCAGTGATGCTGCTTTTAGAACCATGTGGGCAGAATTTGAGTGGGA
AAACAAGGTTGCTGTCAACACTGTCATTCAAGATGAAAAAGATTTTCTTGACCATATAATCAAATCAACCAACATGAAGTGCCTTACTGCGCTGT
CTGCTTTGGAAGGGGAATGCGGGTTTCTCGCTGCTAACTTGTATGCAAAGAGCGTGTTTGGCGAGGATGCTTTGGTGAATGTAAG
AGCGACCCTGTTTATGCGGAAGCATATGTAACAGTTCATCATTATGATATTGTCCTGGATGTGACAGTTATTAATAGAACTAAAGAGACCCTCCA
GAATTTATGTTTGGAATTGGCAACTATGGGTGATCTTAAACTTGTTGAGCGTCCACAGAATTATACTCTAGCTCCTGAGTCGAGCAAACAGATAA
AAGCAAACATCAAGGTGTCCTCAACTGAGACTGGCGTCATTTTTGGGAACATTGTTTATGAGACATCGAATGTGTTTGACCGGATGGTGGTTGTG
CTAAATGACATTCATATTGACATCATGGATTATATATCCCCTGCAGTGTGCAGTGATGCTGCTTTTAGAACCATGTGGGCAGAATTTGAGTGGGA
AAACAAGGTTGCTGTCAACACTGTCATTCAAGATGAAAAAGATTTTCTTGACCATATAATCAAATCAACCAACATGAAGTGCCTTACTGCGCTGT
CTGCTTTGGAAGGGGAATGCGGGTTTCTCGCTGCTAACTTGTATGCAAAGAGCGTGTTTGGCGAGGATGCTTTGGTGAATGTAAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E305551] | SGN-U572670 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T118037 [Download] [View] | Facility Assigned ID: TRXCA53TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0026 | Quality Trim Threshold: 14.5 |
Working
