EST details — SGN-T121822
| Search information |
| Request: TRZAA66TH | Match: SGN-T121822 |
| Request From: web user | Match Type: Chromatogram internal Identifier |
| Clone information |
| SGN ID: SGN-C99954 | Clone name: cLEZ-1-K11 |
| ||
| Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: Alias clone SGN-C182575 is on microarray TOM1: SGN-S1-1-4.3.7.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C99954 [cLEZ-1-K11] | Trace: SGN-T121823 | EST: SGN-E309133 | Direction: 3' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E309132 | Length: 609 bp (883 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E309132 [] (trimmed)
GCTCTTTCTTTTCTATTCTATTCCAACAACAACTCATTCATCCACCTACTACTTTCCCTTTCAAATGGCAACCAAAGTCTACATTGTTTACTACT
CCATGTATGGACATGTTGAGAAGCTAGCACAAGAGATAAAGAAAGGAGCCGCATCAGTTGAAGGCGTAGAAGCCAAACTATGGCAGGTACCAGAA
ACTCTTTCAGAAGAGGTTCTTGGAAAGATGGGTGGACCAGCAAAAGGCGATGCACCAATTATCACACCCAATGACCTTGCTGAAGCTGATGGCTT
TGTGTTTGGATTCCCAACAAGATTTGGGATGATGGCTGCTCAGTTCAAGGCATTTCTTGATGCCACTGGTGGTCTCTGGAGAACTCAGCAGCTTG
CAGGCAAGCCAGCGGGCCTTTTCTACAGTACTGGCTCTCAAGGAGGTGGCCAAGAGACTACTGCGTTGACTGCAATTACTCAGCTTGTTCACCAT
GGAATGATCTTTGTCCCGATTGGTTACACATTTGGTGCTGGCATGTTCGAGATGGAGAAGATTAAAGGTGGAAGTCCTTACGGTGCAGGAACTTT
TGCTGGAGATGGCTCTAGACAGCCAACAGATCTTGAACT
CCATGTATGGACATGTTGAGAAGCTAGCACAAGAGATAAAGAAAGGAGCCGCATCAGTTGAAGGCGTAGAAGCCAAACTATGGCAGGTACCAGAA
ACTCTTTCAGAAGAGGTTCTTGGAAAGATGGGTGGACCAGCAAAAGGCGATGCACCAATTATCACACCCAATGACCTTGCTGAAGCTGATGGCTT
TGTGTTTGGATTCCCAACAAGATTTGGGATGATGGCTGCTCAGTTCAAGGCATTTCTTGATGCCACTGGTGGTCTCTGGAGAACTCAGCAGCTTG
CAGGCAAGCCAGCGGGCCTTTTCTACAGTACTGGCTCTCAAGGAGGTGGCCAAGAGACTACTGCGTTGACTGCAATTACTCAGCTTGTTCACCAT
GGAATGATCTTTGTCCCGATTGGTTACACATTTGGTGCTGGCATGTTCGAGATGGAGAAGATTAAAGGTGGAAGTCCTTACGGTGCAGGAACTTT
TGCTGGAGATGGCTCTAGACAGCCAACAGATCTTGAACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E309132] | SGN-U563063 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T121822 [Download] [View] | Facility Assigned ID: TRZAA66TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0053 | Quality Trim Threshold: 14.5 |
Working
