EST details — SGN-E1313943
| Search information |
| Request: 1313943 | Match: SGN-E1313943 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C1041505 | Clone name: CACATN1-6X11TV |
| ||
| Library Name: Ca_AtMixTis1 | Organism: Coffea arabica |
Tissue: Mixture of leaf, fruit, flower, root and calli
Development Stage: Adult trees
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E1313943 | Length: 884 bp (884 bp untrimmed) |
| Status: Current Version | Direction: Unknown |
>SGN-E1313943 [] (trimmed)
GGCCGGGGGAACTACGATGGTGAATCCTCTAGACTAGGGTCAGCAGAGCGGTTCCCCAAGGCTATTCTTGATGTACCATTTGCCTTCAAAAGAGT
GGAAGCCATGCTATACCGTGCAAACTTTGATGTGGAAGTAAACTACTTGAGAAAATCCTTTCAAACACTAGAGGAGGCAAGTCAAGAACTGAAGA
ACAGCAGGCTATTCCTCAAACTCCTTGAAGCTGTCCTCAGGACAGGAAATCGCATGAATGTAGGAACTAATCGTGGTGATGCCAGGGCCTTCAAA
CTTGATACTCTGCTAAAATTAGTGGACATAAAAGGAACAGATGGGAAGACAACATTGCTTCACTTTGTGGTCCAAGAAATTATTAGATCAGAAGG
TACAGGTTCTGAGCCAACAAATGAAAATATTGCACATAAAACAAATCTGAAAGTCAAAGAGGATGATTTTGAGAAGCAAGGTCTGCAGGTTGTTG
CGGGACTTAGCAAGGAACTTGGGAATGTCAAAAAGGCAGCAGCAATGGACTCAGATGTTCTCAGCAGTTACGTCTCCAAGCTAGAAATTGGACTT
GAGAAAGTTAGATTAGTTTTACAATATGAGAAACCAAGCATGCAAGGTAAATTTTTTGAATCAATGAAGAAGTTTCTAGAAGAAGCAGAAGGGGA
AATTCTCCTCATTAAGGATGAAGAGCAGACGGCCTTGTCCTTAGTAAAGGAGGTTACAGAATACTTTCACGGCAATGCAGCGAAAGAAGAGGCCC
ATCCTTTCAGGATCTTTGTGATTGTAAGAGATTTTCTCTCTATTCTGGATAACGTATGCAAAGAAGTTGGGAGACTGCAGGATAGATCAATAGTT
ATGGGTACAGGCAGATCATTCAGAATGG
GGAAGCCATGCTATACCGTGCAAACTTTGATGTGGAAGTAAACTACTTGAGAAAATCCTTTCAAACACTAGAGGAGGCAAGTCAAGAACTGAAGA
ACAGCAGGCTATTCCTCAAACTCCTTGAAGCTGTCCTCAGGACAGGAAATCGCATGAATGTAGGAACTAATCGTGGTGATGCCAGGGCCTTCAAA
CTTGATACTCTGCTAAAATTAGTGGACATAAAAGGAACAGATGGGAAGACAACATTGCTTCACTTTGTGGTCCAAGAAATTATTAGATCAGAAGG
TACAGGTTCTGAGCCAACAAATGAAAATATTGCACATAAAACAAATCTGAAAGTCAAAGAGGATGATTTTGAGAAGCAAGGTCTGCAGGTTGTTG
CGGGACTTAGCAAGGAACTTGGGAATGTCAAAAAGGCAGCAGCAATGGACTCAGATGTTCTCAGCAGTTACGTCTCCAAGCTAGAAATTGGACTT
GAGAAAGTTAGATTAGTTTTACAATATGAGAAACCAAGCATGCAAGGTAAATTTTTTGAATCAATGAAGAAGTTTCTAGAAGAAGCAGAAGGGGA
AATTCTCCTCATTAAGGATGAAGAGCAGACGGCCTTGTCCTTAGTAAAGGAGGTTACAGAATACTTTCACGGCAATGCAGCGAAAGAAGAGGCCC
ATCCTTTCAGGATCTTTGTGATTGTAAGAGATTTTCTCTCTATTCTGGATAACGTATGCAAAGAAGTTGGGAGACTGCAGGATAGATCAATAGTT
ATGGGTACAGGCAGATCATTCAGAATGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E1313943] | SGN-U612896 | Coffea arabica | Build 1 | 1 ESTs assembled | |
| [SGN-E1313943] | SGN-U630582 | Coffee species | Build 1 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1044600 [Download][View] | Facility Assigned ID: GR996269 |
| Submitter: None | Sequencing Facility: |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: |
Working
