EST details — SGN-E1315637
| Search information |
| Request: 1315637 | Match: SGN-E1315637 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C1042949 | Clone name: CACATN1-5O96TV |
| ||
| Library Name: Ca_AtMixTis1 | Organism: Coffea arabica |
Tissue: Mixture of leaf, fruit, flower, root and calli
Development Stage: Adult trees
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E1315637 | Length: 863 bp (863 bp untrimmed) |
| Status: Current Version | Direction: Unknown |
>SGN-E1315637 [] (trimmed)
GGCCGGGGTCTCCAGAAAAGAATTTACCAAAAACCGGAAGAAATTTTTTTTTAAAAAAGGTTGGTGCAGCTACGAATAAGTAGTCTTGACTTCTC
AGAGTTTATTGGATTGAAGGCTAGGAGAAGAATGGCGGCTAAAAGGGTCTCATCGCTTCTGCTCTCTCGTTCTTTTACATCTTCCCTTGCTTCCC
GGCTAACCGGAGGAAAAAGTGCTTGCCAAGCAAGAGCAATTTCTCGGTATAGCACTGCTGCTGCTCTCGAGGAGCCAATTAAGCCACCGGTTAAT
GTGGAATACACTAAGCTTCTCATTAATGGTCAATTTGTTGATGCAGCCTCAGGGAAGACATTTCCAACTCTGGACCCTAGAACAGGGGAAGTGAT
TGCGCATGTTGCTGAAGGTGATGCAGAAGATGTCAACAGAGCTGTGGCTGCTGCTCGCAAGGCTTTTGATGAAGGACCCTGGCCCAGGCTGACTG
CTTATGACCGGCAAAGAATATTGCTACGCTTCGCTGATTTAGTTGAGAAGCATAACGACGAAATTGCAGCACTAGAGACTTGGGATAATGGCAAG
CCATATGAACAAGCAGCTAAAATTGAAGTTCCTATGTTTGTGCGCCTCATGCGATATTATGCTGGTTGGGCCGACAAGATTCATGGGATGACCGT
TCCTGCTGATGGACCTTATCATGTTCAAACTCTGCACGAACCCATTGGTGTTGCTGGACAAATTATTCCGTGGAACTTCCCTCTCCTAATGTATG
CTTGGAAGGTTGGGCCTGCATTAGCATGTGGCAACACCGTTGTGCTTAAGACAGCAGAGCAGACACCATTATCTGCTCTATATGTGACAAAGCTG
TTGCATG
AGAGTTTATTGGATTGAAGGCTAGGAGAAGAATGGCGGCTAAAAGGGTCTCATCGCTTCTGCTCTCTCGTTCTTTTACATCTTCCCTTGCTTCCC
GGCTAACCGGAGGAAAAAGTGCTTGCCAAGCAAGAGCAATTTCTCGGTATAGCACTGCTGCTGCTCTCGAGGAGCCAATTAAGCCACCGGTTAAT
GTGGAATACACTAAGCTTCTCATTAATGGTCAATTTGTTGATGCAGCCTCAGGGAAGACATTTCCAACTCTGGACCCTAGAACAGGGGAAGTGAT
TGCGCATGTTGCTGAAGGTGATGCAGAAGATGTCAACAGAGCTGTGGCTGCTGCTCGCAAGGCTTTTGATGAAGGACCCTGGCCCAGGCTGACTG
CTTATGACCGGCAAAGAATATTGCTACGCTTCGCTGATTTAGTTGAGAAGCATAACGACGAAATTGCAGCACTAGAGACTTGGGATAATGGCAAG
CCATATGAACAAGCAGCTAAAATTGAAGTTCCTATGTTTGTGCGCCTCATGCGATATTATGCTGGTTGGGCCGACAAGATTCATGGGATGACCGT
TCCTGCTGATGGACCTTATCATGTTCAAACTCTGCACGAACCCATTGGTGTTGCTGGACAAATTATTCCGTGGAACTTCCCTCTCCTAATGTATG
CTTGGAAGGTTGGGCCTGCATTAGCATGTGGCAACACCGTTGTGCTTAAGACAGCAGAGCAGACACCATTATCTGCTCTATATGTGACAAAGCTG
TTGCATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E1315637] | SGN-U606078 | Coffea arabica | Build 1 | 2 ESTs assembled | |
| [SGN-E1315637] | SGN-U637379 | Coffee species | Build 1 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1046296 [Download][View] | Facility Assigned ID: GR998009 |
| Submitter: None | Sequencing Facility: |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: |
Working
