EST details — SGN-E1350768
Search information |
Request: 1350768 | Match: SGN-E1350768 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C1073684 | Clone name: CAET87R-CAEUE93TV |
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Library Name: Ca_SecRoot | Organism: Coffea arabica |
Tissue: Roots
Development Stage: Secondary roots
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E1350768 | Length: 705 bp (705 bp untrimmed) |
Status: Current Version | Direction: Unknown |
>SGN-E1350768 [] (trimmed)
ACCCTTCGATTTGATACACCAGCGATTCCAGATAAACTCTGCTCGCTCCCCTGTATTCATTCGGCTTTTGGAAGAACCAGAGGAGAGGAGAGAGC
AGAAGGAAATGGGCAAGGGTGGTATGAGTGCTCCAGAGAACCAAGATGGTGGGGAAGAGAATATGGCAGCTTGGCTTGTGGGTCTTAACACCCTC
AGGATTCAGCCTTTCAAGCTCCCTCCTCTTGGACCCCATGATGTTAGAGTCCGGATGAAAGCTGTTGGTATCTGTGGAAGCGATGTTCATTTTTC
TCAAGACTTTGCAGCTAGCTCATTTTGTTGTTAAAGAGCCGATGGTTATTGGGCACGAGTGTGCTGGGGTCATTGAAGAAATTGGTGGTGAAGTT
AAGACTCTTGTGCCTGGTGATTCGCGTGGCACTGGAGCCTGGAATCAGTTGTTGGCGATGTGATTCTTGCAGAGGAGGCCGATATAATATGTGCC
CAGAGATGAAGTTTTTTGCTACTCCGCCTGTTCATGGTTCTCTTGCGAATCAGGTCGTGCATCCCGCAAATTTGTGCTTCAAATTACCTGATAAC
GTGAGCTTGGAGGAAGGAGCCATGTGCGAGCCCTTGAGCGTTGGCGTTTATGCTTGCCGCCGCGCCGGAGTTGGTCCCGGGACGCGTGTCTTGGT
GATGGGAGCTGGTCCCATAGGGCTTGTTGCAATGCTTGC
AGAAGGAAATGGGCAAGGGTGGTATGAGTGCTCCAGAGAACCAAGATGGTGGGGAAGAGAATATGGCAGCTTGGCTTGTGGGTCTTAACACCCTC
AGGATTCAGCCTTTCAAGCTCCCTCCTCTTGGACCCCATGATGTTAGAGTCCGGATGAAAGCTGTTGGTATCTGTGGAAGCGATGTTCATTTTTC
TCAAGACTTTGCAGCTAGCTCATTTTGTTGTTAAAGAGCCGATGGTTATTGGGCACGAGTGTGCTGGGGTCATTGAAGAAATTGGTGGTGAAGTT
AAGACTCTTGTGCCTGGTGATTCGCGTGGCACTGGAGCCTGGAATCAGTTGTTGGCGATGTGATTCTTGCAGAGGAGGCCGATATAATATGTGCC
CAGAGATGAAGTTTTTTGCTACTCCGCCTGTTCATGGTTCTCTTGCGAATCAGGTCGTGCATCCCGCAAATTTGTGCTTCAAATTACCTGATAAC
GTGAGCTTGGAGGAAGGAGCCATGTGCGAGCCCTTGAGCGTTGGCGTTTATGCTTGCCGCCGCGCCGGAGTTGGTCCCGGGACGCGTGTCTTGGT
GATGGGAGCTGGTCCCATAGGGCTTGTTGCAATGCTTGC
Unigenes |
Current Unigene builds | |||||
[SGN-E1350768] | SGN-U604890 | Coffea arabica | Build 1 | 10 ESTs assembled | |
[SGN-E1350768] | SGN-U636067 | Coffee species | Build 1 | 16 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T1081433 [Download][View] | Facility Assigned ID: GT015357 |
Submitter: None | Sequencing Facility: |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: |