EST details — SGN-E200400

Search information 
Request: 200400Match: SGN-E200400
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C3218Clone name: cLEC-1-I21
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C180714 is on microarray TOM1: SGN-S1-1-1.2.17.10
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C3218 [cLEC-1-I21] Trace: SGN-T24614 EST: SGN-E200401 Direction: 3' Facility: TIGR
Clone: SGN-C180714 [TUS-35-B8] Trace: SGN-T193668 EST: SGN-E392342 Direction: 5' Facility: INRA
Clone: SGN-C180714 [TUS-35-B8] Trace: SGN-T193926 EST: SGN-E392600 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E200400Length: 504 bp (831 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E200400 [] (trimmed) CTTCAATCCCCTACAGATCGAACAATTACTTAATCTCTCTACGCAAGATCTAGGGTTTTCATCATTCTCACCTTCGTCGGAGAAGATTTCTGGAT
CTCGCAGTTCTAGGGTTCTTCAGATCCAATCGGTTTTTTGAATGCGGATGTGAAATTCTCTATGTTTATGATAATCGTGGAGCATAGATCGACTT
GATATCGGATCGATTTGTTAGTGTATTGAAAATTATAATTTGCGGAGATTATTATTGAAAATGCCTGTGAAAGTAGCAAGTGCGTCATTACGGGA
TCGGACTCAGGAGTTTCAGAGTATAGCGGAGAGGTTAAAGAAGTCATTTTCGTCGGTTCAGAATGGGTCGATTAGCACCAGCACCAGCAGTGGTT
CTAGATCGGAGGAACAGAGGACCACTATTGCTATGCAATCGGAGTTCAATCGGCGAGCCTCCAAAATTGGTTTTGGAATACATCAAACTTCTCAG
AAGCTTGCAAAGCTAGCAAAGTTGGCAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E200400] SGN-U580871 Tomato 200607 Build 2 23 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T24613 [Download] [View] Facility Assigned ID: TCAAA59TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0065 Quality Trim Threshold: 14.5