EST details — SGN-E200727

Search information 
Request: 200727Match: SGN-E200727
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C14840Clone name: cLEC-9-E21
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E200727Length: 542 bp (838 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E200727 [] (trimmed) GAAAAATGTTATGCCACCTGGTCCTTTAGGGTTACCATTTATTGGAAATTTGCATCAATACGATGGTTTAACCCCTCATATTTATTTTTCGAAAC
TTGCCAAGAAATATGGAAAAATATTTTCATTAAAACTTGGTTCTACTCCAATAGTTGTAATTTCTTCAGCAAAATTAGCAAAAGAAGTGTTAAAA
ATACAAGATTTAACATTTTGTAGTAGACCTTCTTTTCTTGGTCAACAAAAATTGTCTTACAATGGTCGTGATATTGGCTTTGCACCTTATAATGA
CTATTGGAGAGAAATGCGAAAAATTTGCGTTGTTCATTTGTTCAGTTTAAAAAAAGTACAATCCTTTAGTCCGGTTCGTGAAGATGAAGTATCAA
GAATGATCACGAAAATATCTCAACAAGCAACTGCTTCTCAAATTACAAATTTAAGTAATTTAGTGATTTCACTAACGAGTACTATTATTTGTAGA
GTTGCTTTTGGTATTAGATATGACGAAGAAGCGCATGAAAAGAGGAGATTTGATGAACTTTTAGCAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E200727] SGN-U577528 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T25021 [Download] [View] Facility Assigned ID: TCABG35TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.940 Expected Error Rate: 0.0042 Quality Trim Threshold: 14.5