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EST details — SGN-E201277

Search information 
Request: 201277Match: SGN-E201277
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C1039Clone name: cLEC-10-J15
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C167762 [TUS-1-F16] Trace: SGN-T451 EST: SGN-E379022 Direction: 3' Facility: Avesthagen
Clone: SGN-C167762 [TUS-1-F16] Trace: SGN-T1229 EST: SGN-E378995 Direction: 5' Facility: Avesthagen
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E201277Length: 415 bp (629 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E201277 [] (trimmed) ACGGTCCAATTTGCTTCAAGGTTCACTACCTATTCCACCGAATTCTACCAGATACTTCTTAATATCCCAAAATAATCTCACCGAAGAAATTCCTC
CATCTATTTGCAATTTGACATCACTGATAATGCTAGATTTGGCTAGAAATAACTTGAAGGGAGCAATTCCGCAATGTTTGGGTAATATTAGTGGC
CTCGAGGTTTTGGATCTTCACAACAACAAACTTTCTGGGAATATTCCAACAATTTTCAGCAATGGAAGTTCACTGAGAAGCCTCAACTTGCACGG
AAATAAACTTGAGGGGAAAATTCCCCGATCTTTGGCTCATTGCAAAGACTTGCAGGTTCTTGATTTAGGAGATAATCATCTCATTGACACATTTC
GCCCCCTTTAAATTTGGGTTTGGGGGGGGGTTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E201277] SGN-U571492 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T24864 [Download] [View] Facility Assigned ID: TCABM56TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0015 Quality Trim Threshold: 14.5