EST details — SGN-E202292

Search information 
Request: 202292Match: SGN-E202292
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C10778Clone name: cLEC-6-E10
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C183871 is on microarray TOM1: SGN-S1-1-4.1.18.4
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C183871 [TUS-43-E21] Trace: SGN-T1785 EST: SGN-E378622 Direction: 5' Facility: Giov. Lab
Clone: SGN-C183871 [TUS-43-E21] Trace: SGN-T196227 EST: SGN-E394901 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E202292Length: 651 bp (823 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E202292 [] (trimmed) GTTGTCTTTGCAAAACCAGCAAGGTGAGACTGCATTATATATTGCTGCAGAAAATGGACATACTTTAGTTGTTGTAGAGATTTTGAAACATTTGG
ACCTTCAAGTTGCTTCTCTTGTTGCAAATAATGGATATGATGCATTCCAAGTTGCAGCAAAGCAAGGTCATCTTGAAGTACTGAAGGAACTATTG
CATTCGTTTCCAAACTTGGTTATGGCTACAGATTCATCCAATTCTACAGCCTTACATACAGCAGCTGCCCAGGGTCATGTTGATGTCGTAAATCT
GCTTCTGGAGATTGATTCGAACCTTGTTAAGATAGCTCGGAACAATGGGAAAACTGTGCTCCATACAGCAGCAAGAATGGGACACTTGGAAATTG
TTAAGTCCCTTCTGAGCAAAGATCCTGACATTGGCTTTAGAACGGATAGTAAAGGCCAAAGTGCCCTGCACATGGCTGTAAAAGGACAAAATGTT
GGCATTGTGCTCGAGTTAATAAAACCGAATTCTTCTGTATTGACCTTGGAAGATAACAAAGGAAATAGAGCTCTTCATATTGCAACAAAAAAGGG
ACGGCCACAGATGGTACAATGTCTTATATCAATTGAATGCATCGATCTGAATGCCATTAATAAGGCTGGAGAAACAGCTCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E202292] SGN-U586261 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T23953 [Download] [View] Facility Assigned ID: TCAAV29TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0058 Quality Trim Threshold: 14.5