EST details — SGN-E202390

Search information 
Request: 202390Match: SGN-E202390
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C10956Clone name: cLEC-6-L6
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C172793 is on microarray TOM1: SGN-S1-1-2.4.20.2
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C172793 [TUS-14-H7] Trace: SGN-T195879 EST: SGN-E394553 Direction: 3' Facility: INRA
Clone: SGN-C172793 [TUS-14-H7] Trace: SGN-T195880 EST: SGN-E394554 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E202390Length: 532 bp (765 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E202390 [] (trimmed) GTTAATGGTGCACTTATTATACGTCCAGCAAATAAAACTAATTATCCTTTTCCTAGACCTACTGCTGAAATTCCCATCATATTAGGGGAGTGGTG
GAAAAGTGATGTACAAGCAGTTGTGAATGAGTTTCTTACAAGTGGAGCAGATGCAAATAAATCTGATGCATTTCTTATAAATGGTCAACCAGGAG
ATTTATATCCTTGCTCAACAAATGACACATTCAAACTAACGGTGGAGAAAAATAAGACATATTTGCTCAGAATTGTTAACGCCGTAATGAATAAT
CTCATGTTTTTCTCCGTTGCAAATCACCAACTCACCGTCGTAGGAACTGACGGTGCGTACGTTAAACCGTTCAAGTCAAATTACATCACAATTTC
CCCGGGTGAAACTATTGATGTTTTACTCGAAGCAAATCAAAACCCTAACCACTATTATATGGGCGCGAAAGCCTACAATAGCGTAGTCGGAGTTG
ATTTTAACAACATAACCACCACCGNCATCGTTCAGTATCGTGGAAATTACTCCACTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E202390] SGN-U581286 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T24051 [Download] [View] Facility Assigned ID: TCAAX63TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0055 Quality Trim Threshold: 14.5