EST details — SGN-E202403

Search information 
Request: 202403Match: SGN-E202403
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C11040Clone name: cLEC-6-P4
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C172850 is on microarray TOM1: SGN-S1-1-1.2.20.7
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C172850 [TUS-14-J16] Trace: SGN-T188026 EST: SGN-E374718 Direction: 3' Facility: INRA
Clone: SGN-C172850 [TUS-14-J16] Trace: SGN-T188027 EST: SGN-E374719 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E202403Length: 470 bp (790 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E202403 [] (trimmed) TTGTTCTTGTTTATTTACTGGATAACAACTTTACATTTAGCATCATATATTACGTACTATATTACTTGTATCTTATTTCCGCTTAGTCTTCGCTA
CCCCATACCTCAATAATGGTTGAAGTCACTATAGGACTACGAACAGTGTGGTTGCCATTGTCTTCAACCCAAGTGATCGACCCAAAGTTTTTACT
CTGATCACTATCACCTATATATCGAATTGTCAAATTATAACTTTGCTTATCATTTTTCCCTTTAAACACCAGAGTTCGCGGAGACACTGAAACTG
TGGAATTCTTAGGAGTTTCAATCTTCACTTTATAAGTTGCTCCACCTTTACCAACATTTGTAAGGGTCCTCCTGAATTTCTGTTCCAACCAGGTG
AAGTTCCCCTCGAGGCTGAACGGGTACAAGGCGATGAATGATGGGTAATTGAGATCAGCCATTTTTGAACATTGAAGAATTACCAAATGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E202403] SGN-U578578 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T24064 [Download] [View] Facility Assigned ID: TCAAX86TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0149 Quality Trim Threshold: 14.5