EST details — SGN-E202428

Search information 
Request: 202428Match: SGN-E202428
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C10877Clone name: cLEC-6-I19
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C172738 is on microarray TOM1: SGN-S1-1-1.1.20.10
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C172738 [TUS-14-E24] Trace: SGN-T195228 EST: SGN-E393902 Direction: 3' Facility: INRA
Clone: SGN-C172738 [TUS-14-E24] Trace: SGN-T195669 EST: SGN-E394343 Direction: 3' Facility: INRA
Clone: SGN-C172738 [TUS-14-E24] Trace: SGN-T195669 EST: SGN-E399049 Direction: 3' Facility: INRA
Clone: SGN-C172738 [TUS-14-E24] Trace: SGN-T195670 EST: SGN-E394344 Direction: 5' Facility: INRA
Clone: SGN-C172738 [TUS-14-E24] Trace: SGN-T200210 EST: SGN-E399050 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E202428Length: 557 bp (841 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E202428 [] (trimmed) CACTAATGGGGTCTGGGGAGGGTAGAGTGTAGGCAGACCTTACCACTACCTCGTGGAGGTAGAGAGGCTGTATTACAATCTCAAATTCCTCGCTG
GTAAGAAACTATGGATGCACTGCTTGCAAGCATTTTGAAGTTTGTCTTAGTAAGCTAAAGCCATGACCTTTTATCTTAGATTTAATTAAAGTATT
GAGACACAGTAACTTCTCTACATGTTTGAATTTCTTTTGGTTAGGTTCTACATCAAACGTATATAAGTTTATTTTGTATCGCCTCTTTATGGACT
TCAAATACTGAGCTTTAATTGCTCCTATGACATTAAAAATATTTAATGCGTAAATTGTTGGAATAATATTGTTGCATTTGGCTTTAGTGTCTGGT
TGTGGAAATTCTTCTCCATGGAAGCAAACCGACTGAATTAGCTATGTGCAAAGAATTAACTGGTAAAAAATAGTTAAACCATTATCTTTTCTATC
TCTCAACCTATACTTGCAGAGCATAGGTGATCTCAAGTTCCAGATAATGGAAGATCGTTGACAGGCAGCGTAAATAGTCAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E202428] SGN-U577743 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T24089 [Download] [View] Facility Assigned ID: TCAAU58TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0045 Quality Trim Threshold: 14.5