EST details — SGN-E203090
Search information |
Request: 203090 | Match: SGN-E203090 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C437 | Clone name: cLEB-3-H15 |
| ||
Library Name: cLEB | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: vegetative shoots including meristems and small expanidng leaves
Development Stage: 8 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C437 [cLEB-3-H15] | Trace: SGN-T22837 | EST: SGN-E203091 | Direction: 3' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E203090 | Length: 365 bp (890 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E203090 [] (trimmed)
CCGGCAACCAACTTTGTTCTGAGAAAATACTTCATTGCTAGCTGTAGCTCGACGGACGGCGGTAAGCAGAACGGCCGGAGGTGATTCCATTTGCT
GTAGAAAATCACAAAATCCAAGCAAGATTAGAAAGAGCATCAGCCTCAAACAAGGAAGTACTATATCTACTACTAATCTTGGTCCTTCATTCACT
TGAGATGTCTTTGTGTAGACCTCCACTTCCTCGACTTCTGCTGAATAACGTCTCGTGTATGAGAAATGCTCAACAAATTTTGCGCCACATAAATG
TTTCCCTCCATGATGGTGGTGCACTGGTACTAACAGGCACCAATGGCTCTGGTTAATCCACATTCTTGCGCATGTTGGCT
GTAGAAAATCACAAAATCCAAGCAAGATTAGAAAGAGCATCAGCCTCAAACAAGGAAGTACTATATCTACTACTAATCTTGGTCCTTCATTCACT
TGAGATGTCTTTGTGTAGACCTCCACTTCCTCGACTTCTGCTGAATAACGTCTCGTGTATGAGAAATGCTCAACAAATTTTGCGCCACATAAATG
TTTCCCTCCATGATGGTGGTGCACTGGTACTAACAGGCACCAATGGCTCTGGTTAATCCACATTCTTGCGCATGTTGGCT
Unigenes |
Current Unigene builds | |||||
[SGN-E203090] | SGN-U574109 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T22836 [Download] [View] | Facility Assigned ID: TSHAK44TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.974 | Expected Error Rate: 0.0039 | Quality Trim Threshold: 14.5 |