EST details — SGN-E203110
Search information |
Request: 203110 | Match: SGN-E203110 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C503 | Clone name: cLEB-3-L17 |
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Library Name: cLEB | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: vegetative shoots including meristems and small expanidng leaves
Development Stage: 8 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C503 [cLEB-3-L17] | Trace: SGN-T22857 | EST: SGN-E203111 | Direction: 3' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E203110 | Length: 411 bp (886 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E203110 [] (trimmed)
AAAAAATGTTTCTCCCCTTTCTAGCCTTAGCAATTTTACTCATTTTCTCTCCTACCACCATAGCAACAACTCCAAGTGAAATCAAAAACTCAACT
CATGAAATCTTCAATGTAAAAGAATCCATTGCTCAATTAGATACAAAACCCCAAACCCCATTTGAAAATCAAGAAGAATATCATGTTGATAATGA
AATTGAACAAGAAAGTGGAAATTTGAAGCTCAAGCTCAACCTCATTCATAGAGACAAACTTCAAATTCCCCATTTTCCATATAACAATGACAAAG
TATTTGAAGGCAGAATCAGTAGAGATTTGAAAAGGGTGTCTAGTATCATTCACAGAATTGAAAATGGTGGTGTTAATTACCGGGTCAAGGAATTC
GGGTCGGATCTTATTTCCGGTATGGATCAAG
CATGAAATCTTCAATGTAAAAGAATCCATTGCTCAATTAGATACAAAACCCCAAACCCCATTTGAAAATCAAGAAGAATATCATGTTGATAATGA
AATTGAACAAGAAAGTGGAAATTTGAAGCTCAAGCTCAACCTCATTCATAGAGACAAACTTCAAATTCCCCATTTTCCATATAACAATGACAAAG
TATTTGAAGGCAGAATCAGTAGAGATTTGAAAAGGGTGTCTAGTATCATTCACAGAATTGAAAATGGTGGTGTTAATTACCGGGTCAAGGAATTC
GGGTCGGATCTTATTTCCGGTATGGATCAAG
Unigenes |
Current Unigene builds | |||||
[SGN-E203110] | SGN-U582656 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T22856 [Download] [View] | Facility Assigned ID: TSHAK69TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.949 | Expected Error Rate: 0.0175 | Quality Trim Threshold: 14.5 |