EST details — SGN-E203380
Search information |
Request: 203380 | Match: SGN-E203380 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C364 | Clone name: cLEB-3-D10 |
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Library Name: cLEB | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: vegetative shoots including meristems and small expanidng leaves
Development Stage: 8 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C364 [cLEB-3-D10] | Trace: SGN-T23125 | EST: SGN-E203379 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E203380 | Length: 498 bp (621 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E203380 [] (trimmed)
AATTTCTTCAAAATTCCACTGTTATGTTGCTAATAGCGAGTGCCAAAGATGCTTACCATTTGTTACATGCATAAATATAACAATATTACAAAAAT
ATATGATAACTCAGTTTATGGTCAAAAAAATAATGAAGAGCTCCAGTGTGCTAAGTACTTCACCCATATGCTCCTAGCTCTACGGAAAATGCTGA
CATAAGATAATAACTTGGGCAGAGTTCTCCTATCGTAAAAAAAAGCCGGCTTAGGGTGAATTGCATCAAACACTCCCATACACACGAGGTGATCG
TCATCTTGATCATACAAAAGAACAGTGCCAACTTCTGCATCTATATGTGGAATTCATTGTTCGCCTATCTGAGAAAGAACAAGAGATCCTCCCTT
TGTCCAAGAAGACAACTTCCCAAATTACCCCACATCAATGTATACAGTATTACAGTGCAATGTACTGTCTTCCTCTTTTCAGATTAACAAATGCA
ACACGACAATCAATAACTATGCA
ATATGATAACTCAGTTTATGGTCAAAAAAATAATGAAGAGCTCCAGTGTGCTAAGTACTTCACCCATATGCTCCTAGCTCTACGGAAAATGCTGA
CATAAGATAATAACTTGGGCAGAGTTCTCCTATCGTAAAAAAAAGCCGGCTTAGGGTGAATTGCATCAAACACTCCCATACACACGAGGTGATCG
TCATCTTGATCATACAAAAGAACAGTGCCAACTTCTGCATCTATATGTGGAATTCATTGTTCGCCTATCTGAGAAAGAACAAGAGATCCTCCCTT
TGTCCAAGAAGACAACTTCCCAAATTACCCCACATCAATGTATACAGTATTACAGTGCAATGTACTGTCTTCCTCTTTTCAGATTAACAAATGCA
ACACGACAATCAATAACTATGCA
Unigenes |
Current Unigene builds | |||||
[SGN-E203380] | SGN-U586127 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T23126 [Download] [View] | Facility Assigned ID: TSHAL17TV |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.957 | Expected Error Rate: 0.0012 | Quality Trim Threshold: 14.5 |