EST details — SGN-E204938

Search information 
Request: 204938Match: SGN-E204938
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C2550Clone name: cLEC-16-G17
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E204938Length: 410 bp (854 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E204938 [] (trimmed) ATAGAAATTAAGACATATATATAACTTATCATTCATAGAAGGACATTAAACTTTAAACTCAAAGCAAAAAAGAAATAACAAAATATGTTCCATGG
CCATCTTCGTAGCCCAGTCTATCTACTCCTACTACAAAACAAGCTAGCTAGAAGAATAACAGAGAAGATAAAGTAACAGAGCTATGTAACTTTCA
TAGTTCATCTTTTTCATTCTTCGACTCAACGTTGCCACCTACTTTGGCTTCCGGACTCTCTGATGTAGTTGTCGATGAAGCTGGTTTTTGAAGCT
TGAAAGGAATAGTTGCGTGTTTCTTGATAAACTTGTACAATGCCACTACAGTTCGGTCAGAATCAACTGGGATTGGATCCGCGGTCTTGTTCCCC
TGTTGGAAGAAAAGGAGTGTGGGAAATCCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E204938] SGN-U563999 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T26827 [Download] [View] Facility Assigned ID: TCACI45TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5