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EST details — SGN-E205196

Search information 
Request: 205196Match: SGN-E205196
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C2501Clone name: cLEC-16-D8
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173412 is on microarray TOM1: SGN-S1-1-7.2.18.7
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C173412 [TUS-16-B2] Trace: SGN-T196713 EST: SGN-E395387 Direction: 3' Facility: INRA
Clone: SGN-C173412 [TUS-16-B2] Trace: SGN-T196816 EST: SGN-E395490 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E205196Length: 517 bp (781 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E205196 [] (trimmed) CTGAGCTGTGTGCTTTCACCGACGGTCTTCTTTTTCTCCTTCGTTTGCTTCAGCTAGCAATTATGGTTCCACCTATCGAAACTCAAGTCAAGTCT
TCAGTGTCTCATAAGTTCTCCATTCCACCACTTAATGAAAGAATACTCTCTTCTATGACACGGAGATCAGTTGCAGCTCATCCTTGGCATGATCT
CGAGATAGGACCTAATGCTCCACAGATTTTCAATGTGGTGATTGAGATCAGTAAGGGGAGCAAGGTGAAGTATGAACTAGACAAAAAAACTGGAC
TGATCAAGGTTGATCGTGTTCTTTACTCATCAGTTGTATACCCCCATAACTATGGGTTCATCCCTCGTACACTCTGTGATGACAGTGACCCTCTG
GATGTCTTAGTCATCATGCAGGAACCTATTCTTCCGGGTTGCTTTCTCAGGGCTAAAGCAATTGGTCTTATGCCCATGATTGATCAGGGAGAAAA
GGACGACAAGATAATTGCTGTCTGTGCTGATGATCCTGAATA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E205196] SGN-U568784 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T27085 [Download] [View] Facility Assigned ID: TCACL16TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0087 Quality Trim Threshold: 14.5