Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E205899

Search information 
Request: 205899Match: SGN-E205899
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C3415Clone name: cLEC-20-H8
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E205899Length: 621 bp (863 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E205899 [] (trimmed) GGCTGGCTCCCTCTTTCTTTGTATGGAAATTCACATACGTCTGGTTCCGCTGAGACAAACACTACTGGCAGTTATGCTTCGTCCCTTCCATCAAA
CCTTTGTCGTCACTTTTCATTTGCTGAGATCAAGGCAGCCACCAATAACTTCGATGAAGCACTGCTTCTTGGGGTGGGTGGTTTTGGCAAAGTAT
ACCAGGGAGAAATTGACGGTGGCACAAAAGTTGCTATCAAACGTGGGAATCCTCTCTCCGAGCAAGGTGTTCATGAATTCCAAACTGAAATTGAA
ATGCTCTCAAAACTTCGCCATCGCCATCTTGTTTCTTTGATTGGTTATTGTGAAGAGAACTGTGAAATGATCCTAGTATATGACTACATGGCTCA
TGGTACCCTTCGTGAGCATCTCTATAAGACCCAGAAGCCTCCTTTACCTTGGAAGCAGAGGCTTGAGATTTGTATTGGTGCTGCTCGTGGGTTGC
ACTATCTTCATACTGGTGCGAAGCATACTATTATCCACCGTGATGTAAAGACCACTAATATCCTCTTGGATGAGAAATGGGTGGCAAAGGTTTCT
GATTTTGGGTTGTCTAAAACAGGTCCTACATTGGATCACACCCATGTGAGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E205899] SGN-U583204 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T27681 [Download] [View] Facility Assigned ID: TCADB40TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.985 Expected Error Rate: 0.0062 Quality Trim Threshold: 14.5