EST details — SGN-E205953

Search information 
Request: 205953Match: SGN-E205953
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C3530Clone name: cLEC-20-O13
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173591 is on microarray TOM1: SGN-S1-1-4.1.18.13
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C173591 [TUS-16-I13] Trace: SGN-T192870 EST: SGN-E391544 Direction: 3' Facility: INRA
Clone: SGN-C173591 [TUS-16-I13] Trace: SGN-T192871 EST: SGN-E391545 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E205953Length: 559 bp (889 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E205953 [] (trimmed) GGAGGTGAACCCATACGTTAAACCAAAGGAAAGAGCACAACATTTTCATATGAAATTGAATTTGTTTGTTTGTTTGTTGTTTTACATGAATCTCC
GGCAATGAATAGGGCGGCGTTAATCAGCTCTCAGGTTAACCCTATTCACATAAGGGCCTCTCTTTTTCATTCTTCCCCAATCTTGGAACGCAGAA
GACGCACACATTGGGATTCTGGAAAAAGTGCCAATAAAGGCTCATCAAGGAAATCATTCTTCTCCAGAAGATATAGGAAGCTTAACTCAAGGAAG
GCACTGTTTGAGAGTGTGAATGGATTTGCTGAACAGTTTTTCCAGAGCTGGCAGCATGACCGTGACGAATATGACCCATCTTCAAGCCGAGACAG
TTCATGGTTTAGACGAGATTTCAGGGCCAGTGGACACAAAGGGGGAAGATCAAAGAACACGGGACAGCATCAACACAGGGTGTTCCAATTCTTGG
AGGAGGAGGATATCGAGATAGAGACCTTTTTCGGTTCTACATTTGGTGGAAACAGATACTATCATTGGTCATTTATTAATGAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E205953] SGN-U575634 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T27735 [Download] [View] Facility Assigned ID: TCACY91TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0108 Quality Trim Threshold: 14.5