Notice: Due to a regional power outage, SGN was briefly unavailable on Saturday, Feb 4. We apologize for the inconvenience.

EST details — SGN-E207249

Search information 
Request: 207249Match: SGN-E207249
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C5112Clone name: cLEC-30-J24
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173737 is on microarray TOM1: SGN-S1-1-2.3.18.14
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E207249Length: 529 bp (804 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E207249 [] (trimmed) GTTGTTGAGGGATGCATAAACCTTCAAAAATTGCCTTCTTTCCTTCATTACCAGCACGACTTGAGAATCATCTCTATAGACAAAAATCAATTGCC
AGGAAAGTTTCCAACTTGGTTGTTAGAGAATAACACCAGACTTGCAGGCCTTTATGCTAGAGGTAATGCTTTCATTGGACCGTGGAAATTGCCAT
CCACTAGTCATCTATGTTTAGAGCAACTTGATGTCTCTAATAACAAACTAAGCGGACATGTTCCAGCAAACATAAGTTCAGCTTTCCCAAAGCTA
AATTTTCTGAACATGTCACAAAATTTGCTTGAAGGTCCTATACCTTCTGATATTGGCGGGTTGTATTTAGTCATGCTGGATATATCTCACAACCT
CTTGTCTGGAGGTGTTCCTAGCGATCTGGCAGTTAGTTCTCCCGCGCTGACTTACCTCCGGCTCTCAAACAATAGGTTGTCAGGGACAATATTTT
CGAAGGATATCAGGCCAAGTACACTAATTTTATTGTACTTGAATGGAAATAGGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E207249] SGN-U569716 Tomato 200607 Build 2 15 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T29245 [Download] [View] Facility Assigned ID: TCAEP60TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0091 Quality Trim Threshold: 14.5