EST details — SGN-E208539

Search information 
Request: 208539Match: SGN-E208539
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C7613Clone name: cLEC-39-J15
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C183924 is on microarray TOM1: SGN-S1-1-7.4.19.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C183924 [TUS-43-H2] Trace: SGN-T198106 EST: SGN-E396780 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E208539Length: 558 bp (822 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E208539 [] (trimmed) ATAAAATCGGGGAAGGTGGTTTTGGATCTGTCTACAAGGGTACACTATCAGATGGCGCAGTTATTGCTGTTAAGCAGCTTTCATCCAAATCGAAA
CAAGGGAAGCGTGAGTTTGTAAATGAGATAGGTATGATCTCTAGTTTACACCACCCAAATCTTGTACAACTATATGGATGTTGTGCTGAACGGAA
TCACCTGCTACTGGTGTATGAGTACATGGAGAACAATAGCCTGGCTCGTGCTTTATTTGGTCCAGAAGAACATCGGCTCAAAATAGACTGGCCAA
CCAGGCAAAAGATCTGTATTGGGATAGCAAAAGGCTTATCTTTCCTACATGAAGAATCGTCATTGAAAATTGTCCATAGAGACATCAAAGCAACG
AATGTACTTCTTGACAAGAAACTAAATCCGAAAATCTCAGACTTTGGTCTGGCCAGACTTGATGATGATGATAACAACACACACATTACCACTAG
AGTTGCCGGAACCATAGGATATATGGCCCCTGAATATGCACTATGGGGCTACTTGACCTACAAAGCAGATGTCTACAGTTTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E208539] SGN-U574241 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T31829 [Download] [View] Facility Assigned ID: TCAFY56TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0095 Quality Trim Threshold: 14.5