EST details — SGN-E209190

Search information 
Request: 209190Match: SGN-E209190
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C7216Clone name: cLEC-38-D24
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C174191 is on microarray TOM1: SGN-S1-1-4.2.16.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C174191 [TUS-18-B13] Trace: SGN-T197213 EST: SGN-E395887 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E209190Length: 417 bp (1014 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E209190 [] (trimmed) TGAAAATCAAAAAACAGTTTTCAAGTCAGTACAAGAACTAGCAAATGAAAATCAAGTTCCAGAAAAGTATATTCATACACAAGGGTCAATCAATA
GCTCTTGTCCCATGCTGAATGTGCCAGTAGTTGACCTTAGACTTCTCACATTCACTGCCAGAAAACAAGAGCTCAACAAACTTCAATCAGGCCTC
AAGTTTTGTGGCTGCATCCAGGTCATAAATCACGGACTAGCAGATTCATTTCTTGACAAAGTGCATGAAATTAGCAAACAGTTCTTTGCTCTTCC
AGCTGAAGAGAAGCTTAAATATGCCAGAACAGTTGATGACATTTATGGATACGGAAACGATTCAGTTCTTTCAGATAAGCAAAAGCTTGATTGGA
CTGACAGATTGTATCTAAATGTGTTTCCTGAAGCTAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E209190] SGN-U563058 Tomato 200607 Build 2 26 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T31725 [Download] [View] Facility Assigned ID: TCAFV24TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.939 Expected Error Rate: 0.0070 Quality Trim Threshold: 14.5