EST details — SGN-E209277
Search information |
Request: 209277 | Match: SGN-E209277 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C8952 | Clone name: cLEC-53-O18 |
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Library Name: cLEC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination
Microarray: This clone is not found on any microarray
See unigene SGN-U581121 for alternative clones/ESTs which are mapped
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E209277 | Length: 441 bp (705 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E209277 [] (trimmed)
CGCCTTGAAGGTCTCATCAAAATGGCAGATCTGACCATAAATCTTGCTGCGATCTGCACACCTGCAGATTACAACACTCGTCCACTTGATACAAT
TTACAGCAATTTCATCGATGCTCTACCAGTGGTCAAGTACTGCTCAGAAAATGGAAAGCGTCTCATTCACTTCTCAACTTGTGAAGTTTATGGGA
AAACCATAGGTGCCTTTTTACCGAAAGACAGCCCACTCCGGCAGGATCCTGCTTATTATGTGCTTAAGGAAGACACCTCCCCTTGCATCTTTGGA
CCAATTGAGAAGCAGCGGTGGTCCTATGCATGTGCAAAACAGTTGATTGAGAGGCTGGTCTATGCTGAGGGTGCGGAGAATGGCTTAGAGTTCAC
TATTGTAAGGCCATTTAACTGGATTGGTCCTAGGATGGATTTTATTCCCGGCATTGATGGT
TTACAGCAATTTCATCGATGCTCTACCAGTGGTCAAGTACTGCTCAGAAAATGGAAAGCGTCTCATTCACTTCTCAACTTGTGAAGTTTATGGGA
AAACCATAGGTGCCTTTTTACCGAAAGACAGCCCACTCCGGCAGGATCCTGCTTATTATGTGCTTAAGGAAGACACCTCCCCTTGCATCTTTGGA
CCAATTGAGAAGCAGCGGTGGTCCTATGCATGTGCAAAACAGTTGATTGAGAGGCTGGTCTATGCTGAGGGTGCGGAGAATGGCTTAGAGTTCAC
TATTGTAAGGCCATTTAACTGGATTGGTCCTAGGATGGATTTTATTCCCGGCATTGATGGT
Unigenes |
Current Unigene builds | |||||
[SGN-E209277] | SGN-U581121 | Tomato 200607 | Build 2 | 81 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T33059 [Download] [View] | Facility Assigned ID: TCAIB93TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.976 | Expected Error Rate: 0.0079 | Quality Trim Threshold: 14.5 |