EST details — SGN-E210614
Search information |
Request: 210614 | Match: SGN-E210614 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C10394 | Clone name: cLEC-68-O5 |
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Library Name: cLEC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E210614 | Length: 767 bp (859 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E210614 [] (trimmed)
TACTCTCGGCACGAGGCTTGGTCCAAGCCTGTTAATTTCTCCCATGACACGATTTGTTCCTACAGTGAACCCATTCATACACAAAATCATCACAA
ACTATGGTAAGAATTGTTTTGTGTGGTTTGGGCCAAGACCAGCAGTGGTGATCATGGATCCAGAAGTTATAAAGGAGGTGATGATGAAGAATTAT
GTGTTTCAGAAGCCAGGTGGCAATCCACTCACCAAATTATTAGCAACTGGAATTGCAGACTATGAGGCAGATAAATGGGCTGTACATAGAAGGCT
TCTCAATCCTGCTTTTCACCTTGACAAGTTGAAGCATATGCTACCTGCATTTAAATTGACTGGTAATGAGATGTTGAGCAAATGGGAGAAAATTG
TGTCTAGAGAAGGATCAGAGATAGATGTGTTGCCATATCTACAAACTTTGACAAGTGATGCAATTTCAAGAACTGCTTTTGGTAGTAGCTACGAA
GAAGGAATAAAGATTTTTGAACTTCAAAAAGAACAAATTCAACTAATTTTAGAAGTGTCACGCACGATATATATTCCAGGATGGAGATTTTTGCC
AACTAAAAGGAACAAAAGAATGAAGCAAATTTTCAATGAAGTAAGAACACTGATACTAGAAATTATCAATAAAAGAATGAGGATGATTGAAGCTG
GAGAATCACATGATGATTTATTGGGTATATTATTGTCATCCAATTTAAAAGAAATTCAACAACATGGGAATAAGAAATTTGGTATGAGCATTGAT
GAGGTGA
ACTATGGTAAGAATTGTTTTGTGTGGTTTGGGCCAAGACCAGCAGTGGTGATCATGGATCCAGAAGTTATAAAGGAGGTGATGATGAAGAATTAT
GTGTTTCAGAAGCCAGGTGGCAATCCACTCACCAAATTATTAGCAACTGGAATTGCAGACTATGAGGCAGATAAATGGGCTGTACATAGAAGGCT
TCTCAATCCTGCTTTTCACCTTGACAAGTTGAAGCATATGCTACCTGCATTTAAATTGACTGGTAATGAGATGTTGAGCAAATGGGAGAAAATTG
TGTCTAGAGAAGGATCAGAGATAGATGTGTTGCCATATCTACAAACTTTGACAAGTGATGCAATTTCAAGAACTGCTTTTGGTAGTAGCTACGAA
GAAGGAATAAAGATTTTTGAACTTCAAAAAGAACAAATTCAACTAATTTTAGAAGTGTCACGCACGATATATATTCCAGGATGGAGATTTTTGCC
AACTAAAAGGAACAAAAGAATGAAGCAAATTTTCAATGAAGTAAGAACACTGATACTAGAAATTATCAATAAAAGAATGAGGATGATTGAAGCTG
GAGAATCACATGATGATTTATTGGGTATATTATTGTCATCCAATTTAAAAGAAATTCAACAACATGGGAATAAGAAATTTGGTATGAGCATTGAT
GAGGTGA
Unigenes |
Current Unigene builds | |||||
[SGN-E210614] | SGN-U578818 | Tomato 200607 | Build 2 | 80 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T33963 [Download] [View] | Facility Assigned ID: TCAKI87TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.942 | Expected Error Rate: 0.0070 | Quality Trim Threshold: 14.5 |