EST details — SGN-E211281
| Search information |
| Request: 211281 | Match: SGN-E211281 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C11166 | Clone name: cLEC-70-I18 |
| ||
| Library Name: cLEC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E211281 | Length: 828 bp (921 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E211281 [] (trimmed)
ATTAAACATGACTACTTCATGGCCTACTACACTTCTTGCTTCTCTATTTCTTTTCTCCCAAATATTTTCTTGCATTGCCCTAGTTCCACTTGAAA
ACACCTTTGAATTCGTCAACGAAGGCGAATTAGGACCTTATATCGTAGAATATCAAGCAGATTATCGTGTTCTTAGTGTTTTCAATAATCCGTTC
CAGCTCTGTTTCTACAACACAACTCCTAATGCGTGGACATTAGCGTTGCGAATGGGCACTGTTCGTTCTGAATCACTCATGCGTTGGGTGTGGGA
AGCAAACAGGGGAAACCCCGTTAAAGAAAACGCGACATTCACGTTTGGAACTAACGGAAATCTCGTATTGGCCGATGCTGACGGTCGAATCGCTT
GGCAGAGCAACACGGCCAATAAGGGGGTGACAGGGTTCAAGTTGTTACCTAACGGTAACATGGTGCTACATGACAAAAAAGGTAAATTCGTCTGG
CAGAGTTTCAACTATCCCACTGACACTTTACTAGTGGGCCAAACTCTCAGATTGTCCGGCCCGAATAAGCTTGTGAGCCGGGCCTCGGTGAAAAA
GAATGCGAACGGGCCTTATAGCTTGGTGGTGCAGCCGAGATTGTTTGCAGTCTACAAGGGAAACAAGGTTGACGTGGAATTAGCTTGGTTCGATT
ATGGAAATACACATTGGAATCGATAAAATTAAATAGTGGGAATCAAAGATTGAAATTTGGATATAGATTTTGCAAATCAACACAAAGAAAGTCAC
ATGTGATGGCATTTACTAAATACAACACAACATTGACATATCTTAGACTTGAAATTGATGGAAATTTA
ACACCTTTGAATTCGTCAACGAAGGCGAATTAGGACCTTATATCGTAGAATATCAAGCAGATTATCGTGTTCTTAGTGTTTTCAATAATCCGTTC
CAGCTCTGTTTCTACAACACAACTCCTAATGCGTGGACATTAGCGTTGCGAATGGGCACTGTTCGTTCTGAATCACTCATGCGTTGGGTGTGGGA
AGCAAACAGGGGAAACCCCGTTAAAGAAAACGCGACATTCACGTTTGGAACTAACGGAAATCTCGTATTGGCCGATGCTGACGGTCGAATCGCTT
GGCAGAGCAACACGGCCAATAAGGGGGTGACAGGGTTCAAGTTGTTACCTAACGGTAACATGGTGCTACATGACAAAAAAGGTAAATTCGTCTGG
CAGAGTTTCAACTATCCCACTGACACTTTACTAGTGGGCCAAACTCTCAGATTGTCCGGCCCGAATAAGCTTGTGAGCCGGGCCTCGGTGAAAAA
GAATGCGAACGGGCCTTATAGCTTGGTGGTGCAGCCGAGATTGTTTGCAGTCTACAAGGGAAACAAGGTTGACGTGGAATTAGCTTGGTTCGATT
ATGGAAATACACATTGGAATCGATAAAATTAAATAGTGGGAATCAAAGATTGAAATTTGGATATAGATTTTGCAAATCAACACAAAGAAAGTCAC
ATGTGATGGCATTTACTAAATACAACACAACATTGACATATCTTAGACTTGAAATTGATGGAAATTTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E211281] | SGN-U569601 | Tomato 200607 | Build 2 | 89 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T34630 [Download] [View] | Facility Assigned ID: TCAKR57TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.980 | Expected Error Rate: 0.0073 | Quality Trim Threshold: 14.5 |
Working
