EST details — SGN-E212190

Search information 
Request: 212190Match: SGN-E212190
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C12583Clone name: cLEC-75-C13
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E212190Length: 785 bp (896 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E212190 [] (trimmed) GAAAGAACCACTATGGATTGTTTTTGAAGTTTCAGGCACCATTCCTCTCACGTCTTACCTACGTGTGTCATCCCATAAAACTATTGATGGTCGTG
GACAAAGGATAATACTCACTGGCAAAGGCTTACAGCTGAAGGATTGTGAGCACATAATCGTATGCAATTTGGAGTTTGAAGGTGGCAGAGGTCAT
GATGTTGACGGCATTCAGATAAAACCAAATTCCAGGCACATTTGGATAGACCGCTGTTCTCTTCGTGATTATGATGATGGGCTAATCGATATTAC
CAGACAAAGCACAGATATAACTATTTCTAGATGTTATTTTGCTCAGCATGATAAGACAATGCTTATTGGAGCAGACCCGTCTCATGTTGGTGATA
GATGTATCAGAGTGACCATCCACCATTGCTTTTTCGATGGGACGAGGCAGAGGCAACCTCGTGTTAGATTTGGTAAAGTTCATCTGTACAACAAT
TACACTAGAAATTGGGGTATATATGCTATTTGTGCTAGTGTAGAATCACAGATATATTCTCAATGCAACATATATGAAGCTTCACAGAAGAAAAA
AGCTTTCGAATACTACACAGAGAAGGCAGCAGATAAGGAGGAAGCAAGAAGTGGTTTAATCAGATCAGAAGGGGACATGTTTCTGAATGGAGCTC
AAGGGAGTTTGTTAACTGGTATTGGGTGGGAGAGTGTGTTTTTCATCCAAGTGAATTTTACCCTGTCTGGACACTGGAACCAGCCTCAGACTCTC
TCAAAGTATTCTCCACATTTGCACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E212190] SGN-U567462 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T36126 [Download] [View] Facility Assigned ID: TCALK19TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.985 Expected Error Rate: 0.0122 Quality Trim Threshold: 14.5