Notice: The contact form functionality has been restored. Apologies for any inconvenience.

EST details — SGN-E212531

Search information 
Request: 212531Match: SGN-E212531
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C12397Clone name: cLEC-74-I14
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E212531Length: 614 bp (906 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E212531 [] (trimmed) CAGGAATTCTGTGCTCTGGATATCCATTGAACTAGTCTTGACATTGAGCCAAATAATTGCAGCAATCGCGGTGTTGGCCATATCAAGGGATGAGC
ACCCACGAGCTCCTCTAGCCCAATGGATAGTTGGTTATGCATCTGGGTGTGTAGCAATTCTCCCTCTTCTCTACTGGCGTTTTCGTCATAGAAAC
CAAAATTCAGATCAGGATTCATCTCAGCAGCCACAGATTTCTTCCCAGGTTGAACTCTCAGCCAGACCATCCTCAAGTACAAGGAGTTCAGAAGG
TGAAGGTCGTCAGACAACTGCTACAGCTTCTACAGGTGGTCAAAGTAATGAAATACTGAGCACAAGGATAAAATCATTTGTTGAGTACTTCAAAA
TGGCATTAGATTGTTTTTTTGCAGTGTGGTTTGTGGTTGGAAATGTGTGGATATTTGGCGGACACTCCTCTTCCTCTGAGGCTCCCAACTTGTAC
AGGTTGTGTATAGTATTTCTGACCTTTAGCTGTATCGGGTATGCCATGCCATTTATTCTATGTGCAACAATATGCTGCTGCCTCCCCTGCATTAT
TTCAGTCATGGGCTTCCGAGAAGATCTGACTCAAAACAAGGCGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E212531] SGN-U568768 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T35898 [Download] [View] Facility Assigned ID: TCALH55TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0052 Quality Trim Threshold: 14.5