EST details — SGN-E213172
| Search information |
| Request: 213172 | Match: SGN-E213172 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C11836 | Clone name: cLEC-72-M12 |
| ||
| Library Name: cLEC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E213172 | Length: 766 bp (922 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E213172 [] (trimmed)
CGAAAGAGATATGGCAAAGCACAACATCTAAGCAAAAGACAAAAGAAGAGACATGGATGGAATGTTACAACTCAACCAAACACGAAAGGGAAAAT
AAGACAGTGACAATTTATTGGTCTTTTTTCTCAAACAGTAGAAGCTCCTTTTCTAGGACAGAAAGTTTAGTCCGCCATGGTGATGATGCAACGAA
GGCCTTCTCCCTTCAGCATTAAATCGAAAGCCTTATTGATTTCAGCAAATGGAAGTGTATGAGTGATGAATTTCTCCAATTCAAGTTCTTTGTTC
ATGTATTTCTCAACAACACAAGGAATATCCGAACGAGGTTTGTAGTTTCCAAAGAAGGTTCCTTTGAGAGTCCGTTCATTCAAAAAGTTCAGAGG
ATGTGTCTTGAACACAGCTTCTTTATGGGGTACACCAACAAGAACCGCCACTCCCCAGCCATCATGGACACATTCAAATGCTGAAATCATAGCAT
CAATGTGACCAGTACATTCCACACTCCTATCGACTCCGCCATCAGTCATCTCAGCAATTACCTCTTGAACTGGTTTACTATAGTCCTTTGGGTTC
ACAAACTCTGTCACACCAAATTTCTTAGCTTGCTCAAATCTACTAGCATTTAAATCAACACCAATTATCCTCGAGGCACCAGCAATTCTGGCTCC
TTCTGCAGCCGCGAGGCCTACAGCTCCTAGTCCAAATATAGCCACACTTGAGGCTTTTTGTGGTTAGCAACATTCAAACTTGCTCCAAGCCTGTC
GAAATT
AAGACAGTGACAATTTATTGGTCTTTTTTCTCAAACAGTAGAAGCTCCTTTTCTAGGACAGAAAGTTTAGTCCGCCATGGTGATGATGCAACGAA
GGCCTTCTCCCTTCAGCATTAAATCGAAAGCCTTATTGATTTCAGCAAATGGAAGTGTATGAGTGATGAATTTCTCCAATTCAAGTTCTTTGTTC
ATGTATTTCTCAACAACACAAGGAATATCCGAACGAGGTTTGTAGTTTCCAAAGAAGGTTCCTTTGAGAGTCCGTTCATTCAAAAAGTTCAGAGG
ATGTGTCTTGAACACAGCTTCTTTATGGGGTACACCAACAAGAACCGCCACTCCCCAGCCATCATGGACACATTCAAATGCTGAAATCATAGCAT
CAATGTGACCAGTACATTCCACACTCCTATCGACTCCGCCATCAGTCATCTCAGCAATTACCTCTTGAACTGGTTTACTATAGTCCTTTGGGTTC
ACAAACTCTGTCACACCAAATTTCTTAGCTTGCTCAAATCTACTAGCATTTAAATCAACACCAATTATCCTCGAGGCACCAGCAATTCTGGCTCC
TTCTGCAGCCGCGAGGCCTACAGCTCCTAGTCCAAATATAGCCACACTTGAGGCTTTTTGTGGTTAGCAACATTCAAACTTGCTCCAAGCCTGTC
GAAATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E213172] | SGN-U579420 | Tomato 200607 | Build 2 | 345 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T35263 [Download] [View] | Facility Assigned ID: TCAKZ78TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0031 | Quality Trim Threshold: 14.5 |
Working
