EST details — SGN-E213889

Search information 
Request: 213889Match: SGN-E213889
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C12958Clone name: cLEC-76-H24
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E213889Length: 682 bp (853 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E213889 [] (trimmed) GGAAGGAGGGGGAGATGATGAAGATCGAAGAGATACAAGTGGATCCACCTAAATCAAATGAAGTTCGAATTAAGATGCTCTTTGCCAGTTTGTGC
CACTCTGACATTATCGCTTCCAATGGCTTTCCCATTCCTTTATTTCCTCGAGTTCTTGGACATGAAGGAGTTGGGTACGAAAATCTTCTCTCTCT
GTTTCATTCTATGCAGAACATGTACCGGTCCAGGGAAGAGCCGGACACAAGGGTCTACTACATGTAACCTTACTCTGCATTTCAGCAAGAGACTG
TTTACATGGCTCTGACCTGTGATGGCAACAATGATCTAGTTAATTCTTGCAAATTGATTCATTTAGCCAATGTCGACTTATTTGAATTTGCAGCA
TGATAGAAAGTGTGGGAGAAAATGTGACAAATCTAAGAAAAGGAGATATAGTGATGCCACTTTATTTGGGAGAATGCAGAGAATGCCCAAATTGC
AAGTCAGGGAAGTCCAATTTATGTCACAAATATCCCTTGACCCTTTCTGGTCTAATGTTGGATGGCACAACAAGAATGTCCATTCATGGAGCACA
AGTATTATACCATAGCTTTAGTTGTGCTACTTGGTCCGAATATACAGTTATTAATGTGAACTACGTAATCAAGGTTGATCCTCAGAAGATCCGCT
TCACATGCTAGCTTGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E213889] SGN-U587094 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T36548 [Download] [View] Facility Assigned ID: TCALR48TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5