EST details — SGN-E214106
| Search information |
| Request: 214106 | Match: SGN-E214106 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C14645 | Clone name: cLEC-80-M6 |
| ||
| Library Name: cLEC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E214106 | Length: 790 bp (868 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E214106 [] (trimmed)
GGGTTGGAGTTTCCCTTCATCATTTTCTGAGAAATAATTTCTAATGGCCGCTCCACCCGCTAGAGCTCGAGCTGATTACGATTACCTCATCAAAC
TCCTTTTGATCGGCGACAGCGGTGTGGGTAAGAGTTGCCTTCTTTTACGTTTCTCAGATGGCTCCTTTACGACCAGTTTTATCACAACTATTGGT
ATTGACTTCAAGATAAGGACCATAGAGCTTGACAGTAAGCGCATCAAACTGCAAATCTGGGATACTGCTGGTCAGGAGCGATTCCGAACAATTAC
AACTGCTTACTACCGTGGAGCCATGGGTATATTGCTGGTGTATGATGTAACTGATGAGTCATCTTTTAACAACATCAGGAACTGGATAAGAAACA
TTGAACAGCATGCCTCCGACAATGTCAACAAAATACTGGTCGGCAACAAGGCTGACATGGATGAAAGCAAAAGGGCTGTTCCTACATCCAAGGGC
CAAGCACTTGCTGATGAATATGGCATTAAATTCTTTGAAACTAGTGCCAAGACAAATATGAATGTTGAGGAGGTTTTCTTTTCCATAGCTCGGGA
TATAAAACAAAGGCTTGCCGAATCTGACTCAAAGGCTGAGCCTCAGACCATCAGGATAAATCAACCGGACCAGGGGAGCAGGATCTTCACAAGGC
GCTCAAAAATCAGNCTTGCTGTGGTTCTTAAAATATCGATTAACAGCAAATGAAGCCAGGATGATGGGAAATACATCCTTAAAATGACCATTTTT
AGTGGAAGGGCTGAAACTAATATCTTTTTT
TCCTTTTGATCGGCGACAGCGGTGTGGGTAAGAGTTGCCTTCTTTTACGTTTCTCAGATGGCTCCTTTACGACCAGTTTTATCACAACTATTGGT
ATTGACTTCAAGATAAGGACCATAGAGCTTGACAGTAAGCGCATCAAACTGCAAATCTGGGATACTGCTGGTCAGGAGCGATTCCGAACAATTAC
AACTGCTTACTACCGTGGAGCCATGGGTATATTGCTGGTGTATGATGTAACTGATGAGTCATCTTTTAACAACATCAGGAACTGGATAAGAAACA
TTGAACAGCATGCCTCCGACAATGTCAACAAAATACTGGTCGGCAACAAGGCTGACATGGATGAAAGCAAAAGGGCTGTTCCTACATCCAAGGGC
CAAGCACTTGCTGATGAATATGGCATTAAATTCTTTGAAACTAGTGCCAAGACAAATATGAATGTTGAGGAGGTTTTCTTTTCCATAGCTCGGGA
TATAAAACAAAGGCTTGCCGAATCTGACTCAAAGGCTGAGCCTCAGACCATCAGGATAAATCAACCGGACCAGGGGAGCAGGATCTTCACAAGGC
GCTCAAAAATCAGNCTTGCTGTGGTTCTTAAAATATCGATTAACAGCAAATGAAGCCAGGATGATGGGAAATACATCCTTAAAATGACCATTTTT
AGTGGAAGGGCTGAAACTAATATCTTTTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E214106] | SGN-U578937 | Tomato 200607 | Build 2 | 22 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T37776 [Download] [View] | Facility Assigned ID: TCAMF75TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.989 | Expected Error Rate: 0.0067 | Quality Trim Threshold: 14.5 |
Working
